Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AC092171.4-201ENST00000609130 632 ntBASIC21.1■□□□□ 0.97
CDH16O75309 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CDH16O75309 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH16O75309 PCDHAC2-203ENST00000615316 3011 ntBASIC21.1■□□□□ 0.97
CDH16O75309 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH16O75309 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDH16O75309 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH16O75309 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH16O75309 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH16O75309 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH16O75309 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH16O75309 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH16O75309 AC007225.1-201ENST00000566331 1836 ntBASIC21.09■□□□□ 0.97
CDH16O75309 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.09■□□□□ 0.97
CDH16O75309 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDH16O75309 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH16O75309 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH16O75309 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.09■□□□□ 0.97
CDH16O75309 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH16O75309 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDH16O75309 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH16O75309 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH16O75309 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH16O75309 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDH16O75309 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH16O75309 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDH16O75309 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH16O75309 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH16O75309 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH16O75309 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDH16O75309 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDH16O75309 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH16O75309 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH16O75309 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.08■□□□□ 0.97
CDH16O75309 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH16O75309 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.07■□□□□ 0.96
CDH16O75309 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.07■□□□□ 0.96
CDH16O75309 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH16O75309 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDH16O75309 AP005435.1-201ENST00000529293 1178 ntBASIC21.07■□□□□ 0.96
CDH16O75309 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.07■□□□□ 0.96
CDH16O75309 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
CDH16O75309 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CDH16O75309 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH16O75309 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDH16O75309 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CDH16O75309 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CDH16O75309 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CDH16O75309 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH16O75309 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH16O75309 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.06■□□□□ 0.96
CDH16O75309 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDH16O75309 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH16O75309 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.06■□□□□ 0.96
CDH16O75309 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH16O75309 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH16O75309 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.06■□□□□ 0.96
CDH16O75309 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CDH16O75309 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH16O75309 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.06■□□□□ 0.96
CDH16O75309 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH16O75309 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH16O75309 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH16O75309 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDH16O75309 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH16O75309 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH16O75309 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH16O75309 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDH16O75309 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH16O75309 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH16O75309 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH16O75309 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH16O75309 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH16O75309 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH16O75309 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH16O75309 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
CDH16O75309 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH16O75309 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
CDH16O75309 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH16O75309 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDH16O75309 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDH16O75309 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CDH16O75309 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.04■□□□□ 0.96
CDH16O75309 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms