Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCN2BO60939 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN2BO60939 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN2BO60939 MIR939-201ENST00000401314 82 ntBASIC19.82■□□□□ 0.76
SCN2BO60939 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN2BO60939 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.82■□□□□ 0.76
SCN2BO60939 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
SCN2BO60939 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SCN2BO60939 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.82■□□□□ 0.76
SCN2BO60939 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN2BO60939 LINC01006-201ENST00000333319 2292 ntBASIC19.82■□□□□ 0.76
SCN2BO60939 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCN2BO60939 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.82■□□□□ 0.76
SCN2BO60939 RASA4CP-201ENST00000424092 1398 ntBASIC19.82■□□□□ 0.76
SCN2BO60939 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN2BO60939 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN2BO60939 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN2BO60939 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN2BO60939 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN2BO60939 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN2BO60939 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN2BO60939 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.81■□□□□ 0.76
SCN2BO60939 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN2BO60939 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN2BO60939 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCN2BO60939 AL355001.2-201ENST00000620617 1191 ntBASIC19.81■□□□□ 0.76
SCN2BO60939 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCN2BO60939 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN2BO60939 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN2BO60939 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN2BO60939 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN2BO60939 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SCN2BO60939 AC006128.1-201ENST00000624704 1661 ntBASIC19.81■□□□□ 0.76
SCN2BO60939 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCN2BO60939 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN2BO60939 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.8■□□□□ 0.76
SCN2BO60939 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN2BO60939 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN2BO60939 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN2BO60939 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN2BO60939 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN2BO60939 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN2BO60939 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN2BO60939 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN2BO60939 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.8■□□□□ 0.76
SCN2BO60939 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN2BO60939 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN2BO60939 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN2BO60939 AL136967.2-201ENST00000623968 743 ntBASIC19.8■□□□□ 0.76
SCN2BO60939 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN2BO60939 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN2BO60939 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN2BO60939 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN2BO60939 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN2BO60939 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN2BO60939 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
SCN2BO60939 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN2BO60939 AF213884.3-201ENST00000563833 479 ntBASIC19.79■□□□□ 0.76
SCN2BO60939 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SCN2BO60939 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SCN2BO60939 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SCN2BO60939 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN2BO60939 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SCN2BO60939 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SCN2BO60939 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN2BO60939 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SCN2BO60939 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SCN2BO60939 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN2BO60939 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN2BO60939 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN2BO60939 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN2BO60939 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN2BO60939 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN2BO60939 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SCN2BO60939 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN2BO60939 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SCN2BO60939 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN2BO60939 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN2BO60939 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.77■□□□□ 0.76
SCN2BO60939 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN2BO60939 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN2BO60939 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN2BO60939 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCN2BO60939 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.77■□□□□ 0.76
SCN2BO60939 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.77■□□□□ 0.76
SCN2BO60939 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.77■□□□□ 0.76
SCN2BO60939 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.77■□□□□ 0.76
SCN2BO60939 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms