Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.78■■□□□ 1.4
CCNT1O60563 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.78■■□□□ 1.4
CCNT1O60563 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNT1O60563 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCNT1O60563 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNT1O60563 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.78■■□□□ 1.4
CCNT1O60563 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNT1O60563 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNT1O60563 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNT1O60563 CLDN5-201ENST00000403084 2357 ntBASIC23.77■■□□□ 1.4
CCNT1O60563 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCNT1O60563 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CCNT1O60563 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCNT1O60563 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.77■■□□□ 1.4
CCNT1O60563 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNT1O60563 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.77■■□□□ 1.4
CCNT1O60563 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCNT1O60563 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.77■■□□□ 1.4
CCNT1O60563 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.77■■□□□ 1.4
CCNT1O60563 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCNT1O60563 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNT1O60563 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCNT1O60563 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.77■■□□□ 1.39
CCNT1O60563 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.76■■□□□ 1.39
CCNT1O60563 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNT1O60563 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCNT1O60563 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
CCNT1O60563 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNT1O60563 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNT1O60563 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNT1O60563 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.76■■□□□ 1.39
CCNT1O60563 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCNT1O60563 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCNT1O60563 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNT1O60563 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.76■■□□□ 1.39
CCNT1O60563 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.76■■□□□ 1.39
CCNT1O60563 IKBKGP1-201ENST00000612193 1073 ntBASIC23.76■■□□□ 1.39
CCNT1O60563 MYCNOS-205ENST00000641950 531 ntBASIC23.76■■□□□ 1.39
CCNT1O60563 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNT1O60563 AL137060.1-201ENST00000618151 2648 ntBASIC23.76■■□□□ 1.39
CCNT1O60563 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCNT1O60563 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CCNT1O60563 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CCNT1O60563 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CCNT1O60563 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.75■■□□□ 1.39
CCNT1O60563 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNT1O60563 AC006015.1-201ENST00000429970 570 ntBASIC23.75■■□□□ 1.39
CCNT1O60563 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.75■■□□□ 1.39
CCNT1O60563 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.75■■□□□ 1.39
CCNT1O60563 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.75■■□□□ 1.39
CCNT1O60563 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.75■■□□□ 1.39
CCNT1O60563 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.75■■□□□ 1.39
CCNT1O60563 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNT1O60563 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CCNT1O60563 AC005229.4-201ENST00000610085 2198 ntBASIC23.75■■□□□ 1.39
CCNT1O60563 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.75■■□□□ 1.39
CCNT1O60563 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCNT1O60563 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNT1O60563 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNT1O60563 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNT1O60563 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNT1O60563 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNT1O60563 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CCNT1O60563 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCNT1O60563 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCNT1O60563 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.74■■□□□ 1.39
CCNT1O60563 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCNT1O60563 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.74■■□□□ 1.39
CCNT1O60563 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.74■■□□□ 1.39
CCNT1O60563 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
CCNT1O60563 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CCNT1O60563 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CCNT1O60563 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CCNT1O60563 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNT1O60563 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNT1O60563 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNT1O60563 KRT18P11-201ENST00000435214 1283 ntBASIC23.73■■□□□ 1.39
CCNT1O60563 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.73■■□□□ 1.39
CCNT1O60563 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.73■■□□□ 1.39
CCNT1O60563 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.73■■□□□ 1.39
CCNT1O60563 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.73■■□□□ 1.39
CCNT1O60563 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNT1O60563 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNT1O60563 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.73■■□□□ 1.39
CCNT1O60563 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.73■■□□□ 1.39
CCNT1O60563 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNT1O60563 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCNT1O60563 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCNT1O60563 SLC7A5P1-201ENST00000568957 537 ntBASIC23.72■■□□□ 1.39
CCNT1O60563 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCNT1O60563 AC092437.1-201ENST00000624794 1048 ntBASIC23.72■■□□□ 1.39
CCNT1O60563 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.72■■□□□ 1.39
CCNT1O60563 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.72■■□□□ 1.39
CCNT1O60563 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCNT1O60563 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCNT1O60563 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCNT1O60563 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCNT1O60563 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CCNT1O60563 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.71■■□□□ 1.39
CCNT1O60563 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms