Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
SSX5O60225 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX5O60225 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.85■□□□□ 0.45
SSX5O60225 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX5O60225 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.85■□□□□ 0.45
SSX5O60225 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX5O60225 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX5O60225 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.85■□□□□ 0.45
SSX5O60225 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX5O60225 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX5O60225 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.85■□□□□ 0.45
SSX5O60225 MIR3181-201ENST00000578512 73 ntBASIC17.85■□□□□ 0.45
SSX5O60225 AP005212.1-201ENST00000581547 1997 ntBASIC17.85■□□□□ 0.45
SSX5O60225 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.85■□□□□ 0.45
SSX5O60225 GABARAPL3-202ENST00000624044 1851 ntBASIC17.85■□□□□ 0.45
SSX5O60225 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX5O60225 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX5O60225 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX5O60225 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX5O60225 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX5O60225 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX5O60225 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX5O60225 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SSX5O60225 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX5O60225 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.84■□□□□ 0.45
SSX5O60225 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.84■□□□□ 0.45
SSX5O60225 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SSX5O60225 AC010525.1-201ENST00000585559 441 ntBASIC17.84■□□□□ 0.45
SSX5O60225 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.84■□□□□ 0.45
SSX5O60225 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX5O60225 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX5O60225 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX5O60225 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX5O60225 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX5O60225 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSX5O60225 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSX5O60225 AC073314.1-201ENST00000568729 2216 ntBASIC17.83■□□□□ 0.45
SSX5O60225 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSX5O60225 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.83■□□□□ 0.45
SSX5O60225 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.83■□□□□ 0.44
SSX5O60225 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX5O60225 UNC93B8-201ENST00000511903 705 ntBASIC17.83■□□□□ 0.44
SSX5O60225 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.83■□□□□ 0.44
SSX5O60225 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.83■□□□□ 0.44
SSX5O60225 AL034346.1-201ENST00000568244 1277 ntBASIC17.83■□□□□ 0.44
SSX5O60225 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.83■□□□□ 0.44
SSX5O60225 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.83■□□□□ 0.44
SSX5O60225 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX5O60225 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSX5O60225 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.83■□□□□ 0.44
SSX5O60225 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
SSX5O60225 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX5O60225 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX5O60225 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.83■□□□□ 0.44
SSX5O60225 AC007952.6-201ENST00000573168 2673 ntBASIC17.83■□□□□ 0.44
SSX5O60225 AC003957.1-201ENST00000625108 2673 ntBASIC17.83■□□□□ 0.44
SSX5O60225 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.83■□□□□ 0.44
SSX5O60225 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX5O60225 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.82■□□□□ 0.44
SSX5O60225 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SSX5O60225 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.82■□□□□ 0.44
SSX5O60225 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.82■□□□□ 0.44
SSX5O60225 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.82■□□□□ 0.44
SSX5O60225 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 AP004607.7-201ENST00000527152 1677 ntBASIC17.82■□□□□ 0.44
SSX5O60225 AC006128.1-201ENST00000624704 1661 ntBASIC17.82■□□□□ 0.44
SSX5O60225 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SSX5O60225 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX5O60225 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.81■□□□□ 0.44
SSX5O60225 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SSX5O60225 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.81■□□□□ 0.44
SSX5O60225 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 PLK5-205ENST00000642079 1969 ntBASIC17.81■□□□□ 0.44
SSX5O60225 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
SSX5O60225 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SSX5O60225 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms