Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MFSD11-216ENST00000590393 1141 ntBASIC20.1■□□□□ 0.81
SLC28A2O43868 AC005181.1-201ENST00000604782 1256 ntBASIC20.1■□□□□ 0.81
SLC28A2O43868 AC231657.2-201ENST00000624556 255 ntBASIC20.1■□□□□ 0.81
SLC28A2O43868 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC28A2O43868 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC28A2O43868 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SLC28A2O43868 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SLC28A2O43868 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC28A2O43868 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC28A2O43868 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC28A2O43868 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC28A2O43868 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC28A2O43868 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.09■□□□□ 0.81
SLC28A2O43868 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC28A2O43868 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC28A2O43868 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC28A2O43868 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC28A2O43868 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC28A2O43868 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC28A2O43868 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC28A2O43868 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC28A2O43868 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC28A2O43868 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SLC28A2O43868 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC28A2O43868 PRORSD1P-201ENST00000295112 541 ntBASIC20.08■□□□□ 0.81
SLC28A2O43868 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC28A2O43868 AC007322.1-201ENST00000426983 750 ntBASIC20.08■□□□□ 0.81
SLC28A2O43868 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
SLC28A2O43868 RPS2P52-201ENST00000469610 820 ntBASIC20.08■□□□□ 0.81
SLC28A2O43868 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.08■□□□□ 0.81
SLC28A2O43868 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC28A2O43868 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.08■□□□□ 0.81
SLC28A2O43868 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SLC28A2O43868 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC28A2O43868 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC28A2O43868 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.08■□□□□ 0.8
SLC28A2O43868 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.08■□□□□ 0.8
SLC28A2O43868 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC28A2O43868 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SLC28A2O43868 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC28A2O43868 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC28A2O43868 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.08■□□□□ 0.8
SLC28A2O43868 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC28A2O43868 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A2O43868 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A2O43868 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A2O43868 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A2O43868 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A2O43868 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC28A2O43868 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A2O43868 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.07■□□□□ 0.8
SLC28A2O43868 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC28A2O43868 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A2O43868 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.07■□□□□ 0.8
SLC28A2O43868 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC28A2O43868 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC28A2O43868 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC28A2O43868 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SLC28A2O43868 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC28A2O43868 AC244015.2-201ENST00000616358 1861 ntBASIC20.07■□□□□ 0.8
SLC28A2O43868 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A2O43868 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A2O43868 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A2O43868 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A2O43868 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A2O43868 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC28A2O43868 AC026310.3-201ENST00000625186 2373 ntBASIC20.06■□□□□ 0.8
SLC28A2O43868 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC28A2O43868 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A2O43868 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC28A2O43868 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.06■□□□□ 0.8
SLC28A2O43868 AC010141.3-201ENST00000456659 717 ntBASIC20.06■□□□□ 0.8
SLC28A2O43868 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.06■□□□□ 0.8
SLC28A2O43868 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SLC28A2O43868 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A2O43868 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A2O43868 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A2O43868 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A2O43868 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SLC28A2O43868 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A2O43868 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A2O43868 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A2O43868 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A2O43868 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A2O43868 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A2O43868 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SLC28A2O43868 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A2O43868 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SLC28A2O43868 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC28A2O43868 RNA5SP413-201ENST00000516373 109 ntBASIC20.05■□□□□ 0.8
SLC28A2O43868 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC28A2O43868 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC28A2O43868 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC28A2O43868 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A2O43868 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A2O43868 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SLC28A2O43868 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A2O43868 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC28A2O43868 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A2O43868 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms