Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.42■□□□□ 0.54
SGCEO43556 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SGCEO43556 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.42■□□□□ 0.54
SGCEO43556 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SGCEO43556 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SGCEO43556 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.41■□□□□ 0.54
SGCEO43556 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.41■□□□□ 0.54
SGCEO43556 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SGCEO43556 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.41■□□□□ 0.54
SGCEO43556 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGCEO43556 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SGCEO43556 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGCEO43556 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SGCEO43556 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SGCEO43556 AC123595.1-201ENST00000440769 1046 ntBASIC18.41■□□□□ 0.54
SGCEO43556 YBX1P1-201ENST00000445822 960 ntBASIC18.41■□□□□ 0.54
SGCEO43556 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.41■□□□□ 0.54
SGCEO43556 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.41■□□□□ 0.54
SGCEO43556 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGCEO43556 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.41■□□□□ 0.54
SGCEO43556 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.41■□□□□ 0.54
SGCEO43556 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.41■□□□□ 0.54
SGCEO43556 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGCEO43556 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.41■□□□□ 0.54
SGCEO43556 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGCEO43556 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SGCEO43556 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGCEO43556 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.41■□□□□ 0.54
SGCEO43556 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SGCEO43556 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.4■□□□□ 0.54
SGCEO43556 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SGCEO43556 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.4■□□□□ 0.54
SGCEO43556 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGCEO43556 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SGCEO43556 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGCEO43556 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SGCEO43556 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SGCEO43556 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SGCEO43556 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGCEO43556 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SGCEO43556 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SGCEO43556 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.4■□□□□ 0.54
SGCEO43556 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.4■□□□□ 0.54
SGCEO43556 AC053503.5-201ENST00000601508 636 ntBASIC18.4■□□□□ 0.54
SGCEO43556 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGCEO43556 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGCEO43556 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGCEO43556 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SGCEO43556 AC005229.4-201ENST00000610085 2198 ntBASIC18.4■□□□□ 0.54
SGCEO43556 KRT87P-202ENST00000534226 1464 ntBASIC18.39■□□□□ 0.54
SGCEO43556 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SGCEO43556 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
SGCEO43556 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.39■□□□□ 0.54
SGCEO43556 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SGCEO43556 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.39■□□□□ 0.53
SGCEO43556 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.39■□□□□ 0.53
SGCEO43556 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SGCEO43556 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.39■□□□□ 0.53
SGCEO43556 EEF1DP3-203ENST00000566025 782 ntBASIC18.39■□□□□ 0.53
SGCEO43556 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.39■□□□□ 0.53
SGCEO43556 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
SGCEO43556 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.39■□□□□ 0.53
SGCEO43556 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SGCEO43556 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SGCEO43556 AF106564.1-201ENST00000607058 2553 ntBASIC18.38■□□□□ 0.53
SGCEO43556 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SGCEO43556 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGCEO43556 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.38■□□□□ 0.53
SGCEO43556 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
SGCEO43556 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SGCEO43556 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGCEO43556 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.38■□□□□ 0.53
SGCEO43556 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGCEO43556 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGCEO43556 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGCEO43556 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SGCEO43556 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SGCEO43556 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGCEO43556 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGCEO43556 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGCEO43556 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SGCEO43556 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SGCEO43556 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGCEO43556 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SGCEO43556 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms