Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COCHO43405 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COCHO43405 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COCHO43405 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
COCHO43405 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COCHO43405 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.7■■□□□ 1.06
COCHO43405 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.7■■□□□ 1.06
COCHO43405 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
COCHO43405 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.7■■□□□ 1.06
COCHO43405 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.7■■□□□ 1.06
COCHO43405 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.7■■□□□ 1.06
COCHO43405 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COCHO43405 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COCHO43405 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COCHO43405 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
COCHO43405 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
COCHO43405 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.69■■□□□ 1.06
COCHO43405 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.69■■□□□ 1.06
COCHO43405 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
COCHO43405 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
COCHO43405 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
COCHO43405 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
COCHO43405 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
COCHO43405 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COCHO43405 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COCHO43405 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COCHO43405 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
COCHO43405 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.68■■□□□ 1.06
COCHO43405 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COCHO43405 AC073210.2-201ENST00000430369 194 ntBASIC21.68■■□□□ 1.06
COCHO43405 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COCHO43405 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.68■■□□□ 1.06
COCHO43405 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.68■■□□□ 1.06
COCHO43405 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
COCHO43405 AC133041.1-202ENST00000642053 222 ntBASIC21.68■■□□□ 1.06
COCHO43405 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COCHO43405 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COCHO43405 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COCHO43405 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COCHO43405 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COCHO43405 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.68■■□□□ 1.06
COCHO43405 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COCHO43405 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COCHO43405 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COCHO43405 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COCHO43405 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
COCHO43405 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
COCHO43405 AC010980.2-201ENST00000587099 1412 ntBASIC21.67■■□□□ 1.06
COCHO43405 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COCHO43405 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.67■■□□□ 1.06
COCHO43405 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.67■■□□□ 1.06
COCHO43405 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.67■■□□□ 1.06
COCHO43405 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.67■■□□□ 1.06
COCHO43405 EP400NL-214ENST00000641289 2402 ntBASIC21.67■■□□□ 1.06
COCHO43405 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.67■■□□□ 1.06
COCHO43405 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
COCHO43405 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
COCHO43405 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.66■■□□□ 1.06
COCHO43405 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COCHO43405 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COCHO43405 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.66■■□□□ 1.06
COCHO43405 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COCHO43405 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.66■■□□□ 1.06
COCHO43405 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COCHO43405 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COCHO43405 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.66■■□□□ 1.06
COCHO43405 MIR4758-201ENST00000577688 71 ntBASIC21.66■■□□□ 1.06
COCHO43405 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COCHO43405 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
COCHO43405 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.66■■□□□ 1.06
COCHO43405 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
COCHO43405 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COCHO43405 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COCHO43405 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COCHO43405 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.65■■□□□ 1.06
COCHO43405 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.65■■□□□ 1.06
COCHO43405 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COCHO43405 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.65■■□□□ 1.06
COCHO43405 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COCHO43405 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COCHO43405 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COCHO43405 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COCHO43405 BX276092.2-201ENST00000417668 665 ntBASIC21.65■■□□□ 1.06
COCHO43405 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COCHO43405 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.65■■□□□ 1.06
COCHO43405 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COCHO43405 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
COCHO43405 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
COCHO43405 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COCHO43405 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.64■■□□□ 1.06
COCHO43405 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COCHO43405 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COCHO43405 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
COCHO43405 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
COCHO43405 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.64■■□□□ 1.05
COCHO43405 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.64■■□□□ 1.05
COCHO43405 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.64■■□□□ 1.05
COCHO43405 FAM21FP-204ENST00000608637 956 ntBASIC21.64■■□□□ 1.05
COCHO43405 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
COCHO43405 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms