Protein–RNA interactions for Protein: O43255

SIAH2, E3 ubiquitin-protein ligase SIAH2, humanhuman

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIAH2O43255 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIAH2O43255 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIAH2O43255 AC091874.3-201ENST00000512672 1195 ntBASIC18.12■□□□□ 0.49
SIAH2O43255 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIAH2O43255 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.12■□□□□ 0.49
SIAH2O43255 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SIAH2O43255 C1orf229-201ENST00000623686 2258 ntBASIC18.12■□□□□ 0.49
SIAH2O43255 C9orf163-202ENST00000624034 2573 ntBASIC18.12■□□□□ 0.49
SIAH2O43255 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
SIAH2O43255 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.12■□□□□ 0.49
SIAH2O43255 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIAH2O43255 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.12■□□□□ 0.49
SIAH2O43255 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.12■□□□□ 0.49
SIAH2O43255 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIAH2O43255 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.12■□□□□ 0.49
SIAH2O43255 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.11■□□□□ 0.49
SIAH2O43255 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIAH2O43255 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIAH2O43255 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.11■□□□□ 0.49
SIAH2O43255 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SIAH2O43255 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIAH2O43255 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIAH2O43255 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIAH2O43255 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.11■□□□□ 0.49
SIAH2O43255 DUSP5P2-201ENST00000426873 1033 ntBASIC18.11■□□□□ 0.49
SIAH2O43255 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SIAH2O43255 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.11■□□□□ 0.49
SIAH2O43255 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.11■□□□□ 0.49
SIAH2O43255 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.11■□□□□ 0.49
SIAH2O43255 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.11■□□□□ 0.49
SIAH2O43255 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.11■□□□□ 0.49
SIAH2O43255 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.11■□□□□ 0.49
SIAH2O43255 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.11■□□□□ 0.49
SIAH2O43255 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SIAH2O43255 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIAH2O43255 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIAH2O43255 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIAH2O43255 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.11■□□□□ 0.49
SIAH2O43255 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIAH2O43255 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SIAH2O43255 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.1■□□□□ 0.49
SIAH2O43255 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIAH2O43255 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIAH2O43255 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.1■□□□□ 0.49
SIAH2O43255 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIAH2O43255 AC097658.1-201ENST00000475555 843 ntBASIC18.1■□□□□ 0.49
SIAH2O43255 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.1■□□□□ 0.49
SIAH2O43255 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.1■□□□□ 0.49
SIAH2O43255 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.1■□□□□ 0.49
SIAH2O43255 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.1■□□□□ 0.49
SIAH2O43255 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIAH2O43255 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SIAH2O43255 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIAH2O43255 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIAH2O43255 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIAH2O43255 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SIAH2O43255 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.1■□□□□ 0.49
SIAH2O43255 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.1■□□□□ 0.49
SIAH2O43255 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.09■□□□□ 0.49
SIAH2O43255 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SIAH2O43255 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.09■□□□□ 0.49
SIAH2O43255 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SIAH2O43255 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIAH2O43255 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIAH2O43255 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIAH2O43255 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.09■□□□□ 0.49
SIAH2O43255 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIAH2O43255 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.09■□□□□ 0.49
SIAH2O43255 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SIAH2O43255 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIAH2O43255 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIAH2O43255 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIAH2O43255 KRT18P29-201ENST00000397031 1267 ntBASIC18.09■□□□□ 0.49
SIAH2O43255 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.09■□□□□ 0.49
SIAH2O43255 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.09■□□□□ 0.49
SIAH2O43255 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.09■□□□□ 0.49
SIAH2O43255 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.09■□□□□ 0.49
SIAH2O43255 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIAH2O43255 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIAH2O43255 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIAH2O43255 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIAH2O43255 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIAH2O43255 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIAH2O43255 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIAH2O43255 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIAH2O43255 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIAH2O43255 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIAH2O43255 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
SIAH2O43255 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIAH2O43255 AC091799.1-201ENST00000422823 811 ntBASIC18.08■□□□□ 0.48
SIAH2O43255 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.08■□□□□ 0.48
SIAH2O43255 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.08■□□□□ 0.48
SIAH2O43255 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIAH2O43255 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.08■□□□□ 0.48
SIAH2O43255 AC093827.2-201ENST00000512654 315 ntBASIC18.08■□□□□ 0.48
SIAH2O43255 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.08■□□□□ 0.48
SIAH2O43255 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIAH2O43255 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIAH2O43255 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SIAH2O43255 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms