Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC34.48■■■■□ 3.11
CHD1O14646 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC34.48■■■■□ 3.11
CHD1O14646 AL023875.1-201ENST00000640777 796 ntBASIC34.48■■■■□ 3.11
CHD1O14646 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC34.48■■■■□ 3.11
CHD1O14646 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
CHD1O14646 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC34.48■■■■□ 3.11
CHD1O14646 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
CHD1O14646 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
CHD1O14646 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC34.47■■■■□ 3.11
CHD1O14646 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC34.47■■■■□ 3.11
CHD1O14646 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
CHD1O14646 MED17-227ENST00000640521 2047 ntTSL 5 BASIC34.47■■■■□ 3.11
CHD1O14646 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
CHD1O14646 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC34.47■■■■□ 3.11
CHD1O14646 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC34.47■■■■□ 3.11
CHD1O14646 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
CHD1O14646 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
CHD1O14646 TPM1-226ENST00000560959 925 ntTSL 2 BASIC34.47■■■■□ 3.11
CHD1O14646 RARRES2P10-201ENST00000564312 460 ntBASIC34.47■■■■□ 3.11
CHD1O14646 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
CHD1O14646 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CHD1O14646 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CHD1O14646 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CHD1O14646 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CHD1O14646 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC34.46■■■■□ 3.11
CHD1O14646 KRASP1-201ENST00000407852 552 ntBASIC34.46■■■■□ 3.11
CHD1O14646 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC34.46■■■■□ 3.11
CHD1O14646 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC34.46■■■■□ 3.11
CHD1O14646 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.11
CHD1O14646 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC34.45■■■■□ 3.11
CHD1O14646 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
CHD1O14646 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC34.45■■■■□ 3.11
CHD1O14646 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC34.45■■■■□ 3.11
CHD1O14646 RBM42-202ENST00000586618 771 ntTSL 3 BASIC34.45■■■■□ 3.11
CHD1O14646 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.11
CHD1O14646 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC34.45■■■■□ 3.11
CHD1O14646 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
CHD1O14646 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CHD1O14646 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC34.44■■■■□ 3.1
CHD1O14646 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC34.44■■■■□ 3.1
CHD1O14646 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC34.44■■■■□ 3.1
CHD1O14646 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
CHD1O14646 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CHD1O14646 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
CHD1O14646 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC34.44■■■■□ 3.1
CHD1O14646 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC34.44■■■■□ 3.1
CHD1O14646 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC34.44■■■■□ 3.1
CHD1O14646 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CHD1O14646 AC105020.6-201ENST00000621523 1217 ntBASIC34.44■■■■□ 3.1
CHD1O14646 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
CHD1O14646 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC34.43■■■■□ 3.1
CHD1O14646 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CHD1O14646 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
CHD1O14646 RARG-204ENST00000543726 1779 ntTSL 2 BASIC34.43■■■■□ 3.1
CHD1O14646 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
CHD1O14646 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
CHD1O14646 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC34.43■■■■□ 3.1
CHD1O14646 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CHD1O14646 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CHD1O14646 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC34.42■■■■□ 3.1
CHD1O14646 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
CHD1O14646 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
CHD1O14646 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
CHD1O14646 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
CHD1O14646 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC34.42■■■■□ 3.1
CHD1O14646 PRKY-204ENST00000533551 1019 ntBASIC34.42■■■■□ 3.1
CHD1O14646 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC34.42■■■■□ 3.1
CHD1O14646 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC34.42■■■■□ 3.1
CHD1O14646 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC34.42■■■■□ 3.1
CHD1O14646 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC34.42■■■■□ 3.1
CHD1O14646 GCK-205ENST00000437084 1385 ntTSL 5 BASIC34.42■■■■□ 3.1
CHD1O14646 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CHD1O14646 NME3-204ENST00000563498 920 ntTSL 2 BASIC34.41■■■■□ 3.1
CHD1O14646 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC34.41■■■■□ 3.1
CHD1O14646 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC34.41■■■■□ 3.1
CHD1O14646 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CHD1O14646 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC34.4■■■■□ 3.1
CHD1O14646 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC34.4■■■■□ 3.1
CHD1O14646 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC34.4■■■■□ 3.1
CHD1O14646 RMI2-205ENST00000576027 818 ntTSL 2 BASIC34.4■■■■□ 3.1
CHD1O14646 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC34.4■■■■□ 3.1
CHD1O14646 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC34.4■■■■□ 3.1
CHD1O14646 AC142381.3-201ENST00000568208 1670 ntBASIC34.39■■■■□ 3.1
CHD1O14646 AC110285.5-201ENST00000611501 352 ntBASIC34.39■■■■□ 3.1
CHD1O14646 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC34.39■■■■□ 3.1
CHD1O14646 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
CHD1O14646 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC34.39■■■■□ 3.1
CHD1O14646 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CHD1O14646 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC34.39■■■■□ 3.1
CHD1O14646 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC34.39■■■■□ 3.1
CHD1O14646 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC34.38■■■■□ 3.09
CHD1O14646 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC34.38■■■■□ 3.09
CHD1O14646 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
CHD1O14646 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC34.38■■■■□ 3.09
CHD1O14646 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
CHD1O14646 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC34.38■■■■□ 3.09
CHD1O14646 KRT18P57-201ENST00000443599 1254 ntBASIC34.37■■■■□ 3.09
CHD1O14646 KRT8P9-201ENST00000558927 1449 ntBASIC34.37■■■■□ 3.09
CHD1O14646 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
CHD1O14646 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms