Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTCAO00442 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTCAO00442 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTCAO00442 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.94■□□□□ 0.78
RTCAO00442 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.94■□□□□ 0.78
RTCAO00442 AP001160.3-201ENST00000601484 763 ntBASIC19.94■□□□□ 0.78
RTCAO00442 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTCAO00442 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RTCAO00442 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTCAO00442 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RTCAO00442 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTCAO00442 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTCAO00442 AL049796.1-201ENST00000565336 1766 ntBASIC19.93■□□□□ 0.78
RTCAO00442 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTCAO00442 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RTCAO00442 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTCAO00442 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RTCAO00442 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTCAO00442 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTCAO00442 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RTCAO00442 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RTCAO00442 AC010141.2-201ENST00000452426 721 ntBASIC19.93■□□□□ 0.78
RTCAO00442 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.93■□□□□ 0.78
RTCAO00442 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.93■□□□□ 0.78
RTCAO00442 AC008175.2-201ENST00000612840 297 ntBASIC19.93■□□□□ 0.78
RTCAO00442 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.93■□□□□ 0.78
RTCAO00442 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTCAO00442 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTCAO00442 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.93■□□□□ 0.78
RTCAO00442 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RTCAO00442 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTCAO00442 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTCAO00442 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTCAO00442 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTCAO00442 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.92■□□□□ 0.78
RTCAO00442 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.92■□□□□ 0.78
RTCAO00442 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RTCAO00442 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.92■□□□□ 0.78
RTCAO00442 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RTCAO00442 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.92■□□□□ 0.78
RTCAO00442 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTCAO00442 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTCAO00442 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
RTCAO00442 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.92■□□□□ 0.78
RTCAO00442 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.92■□□□□ 0.78
RTCAO00442 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.92■□□□□ 0.78
RTCAO00442 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.92■□□□□ 0.78
RTCAO00442 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.92■□□□□ 0.78
RTCAO00442 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.92■□□□□ 0.78
RTCAO00442 NTF6G-201ENST00000591094 616 ntBASIC19.92■□□□□ 0.78
RTCAO00442 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RTCAO00442 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTCAO00442 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTCAO00442 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.92■□□□□ 0.78
RTCAO00442 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTCAO00442 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.91■□□□□ 0.78
RTCAO00442 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.91■□□□□ 0.78
RTCAO00442 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.91■□□□□ 0.78
RTCAO00442 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
RTCAO00442 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTCAO00442 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTCAO00442 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RTCAO00442 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.91■□□□□ 0.78
RTCAO00442 SLC7A5P2-201ENST00000553010 536 ntBASIC19.91■□□□□ 0.78
RTCAO00442 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.91■□□□□ 0.78
RTCAO00442 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTCAO00442 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RTCAO00442 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTCAO00442 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTCAO00442 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTCAO00442 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.91■□□□□ 0.78
RTCAO00442 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.9■□□□□ 0.78
RTCAO00442 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.9■□□□□ 0.78
RTCAO00442 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTCAO00442 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.9■□□□□ 0.78
RTCAO00442 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTCAO00442 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTCAO00442 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.9■□□□□ 0.78
RTCAO00442 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTCAO00442 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTCAO00442 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTCAO00442 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTCAO00442 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RTCAO00442 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTCAO00442 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTCAO00442 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTCAO00442 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTCAO00442 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTCAO00442 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTCAO00442 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTCAO00442 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTCAO00442 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTCAO00442 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTCAO00442 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.89■□□□□ 0.77
RTCAO00442 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTCAO00442 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.89■□□□□ 0.77
RTCAO00442 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTCAO00442 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RTCAO00442 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RTCAO00442 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms