Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.46■□□□□ 0.87
EIF3FO00303 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3FO00303 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3FO00303 KRT19P1-201ENST00000405746 1186 ntBASIC20.46■□□□□ 0.87
EIF3FO00303 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.46■□□□□ 0.87
EIF3FO00303 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3FO00303 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3FO00303 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3FO00303 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3FO00303 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3FO00303 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3FO00303 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3FO00303 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3FO00303 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3FO00303 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3FO00303 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3FO00303 AC004854.2-201ENST00000608450 1441 ntBASIC20.45■□□□□ 0.86
EIF3FO00303 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3FO00303 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3FO00303 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.45■□□□□ 0.86
EIF3FO00303 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3FO00303 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.45■□□□□ 0.86
EIF3FO00303 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3FO00303 AC034268.1-201ENST00000441047 882 ntBASIC20.45■□□□□ 0.86
EIF3FO00303 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3FO00303 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3FO00303 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.45■□□□□ 0.86
EIF3FO00303 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.45■□□□□ 0.86
EIF3FO00303 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
EIF3FO00303 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.45■□□□□ 0.86
EIF3FO00303 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
EIF3FO00303 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
EIF3FO00303 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.45■□□□□ 0.86
EIF3FO00303 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3FO00303 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3FO00303 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.45■□□□□ 0.86
EIF3FO00303 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.45■□□□□ 0.86
EIF3FO00303 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.45■□□□□ 0.86
EIF3FO00303 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.45■□□□□ 0.86
EIF3FO00303 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3FO00303 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3FO00303 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.44■□□□□ 0.86
EIF3FO00303 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
EIF3FO00303 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
EIF3FO00303 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
EIF3FO00303 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3FO00303 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
EIF3FO00303 SLC7A5P1-201ENST00000568957 537 ntBASIC20.44■□□□□ 0.86
EIF3FO00303 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3FO00303 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.44■□□□□ 0.86
EIF3FO00303 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3FO00303 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.43■□□□□ 0.86
EIF3FO00303 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EIF3FO00303 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.43■□□□□ 0.86
EIF3FO00303 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EIF3FO00303 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
EIF3FO00303 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EIF3FO00303 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.43■□□□□ 0.86
EIF3FO00303 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.43■□□□□ 0.86
EIF3FO00303 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.43■□□□□ 0.86
EIF3FO00303 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.43■□□□□ 0.86
EIF3FO00303 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.43■□□□□ 0.86
EIF3FO00303 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.43■□□□□ 0.86
EIF3FO00303 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.43■□□□□ 0.86
EIF3FO00303 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.43■□□□□ 0.86
EIF3FO00303 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EIF3FO00303 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
EIF3FO00303 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
EIF3FO00303 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3FO00303 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
EIF3FO00303 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3FO00303 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
EIF3FO00303 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3FO00303 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.42■□□□□ 0.86
EIF3FO00303 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3FO00303 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EIF3FO00303 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.42■□□□□ 0.86
EIF3FO00303 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
EIF3FO00303 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
EIF3FO00303 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3FO00303 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.41■□□□□ 0.86
EIF3FO00303 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3FO00303 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3FO00303 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3FO00303 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3FO00303 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3FO00303 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3FO00303 AC245052.3-201ENST00000450182 901 ntBASIC20.41■□□□□ 0.86
EIF3FO00303 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.41■□□□□ 0.86
EIF3FO00303 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.41■□□□□ 0.86
EIF3FO00303 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
EIF3FO00303 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3FO00303 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3FO00303 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3FO00303 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.41■□□□□ 0.86
EIF3FO00303 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
EIF3FO00303 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EIF3FO00303 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
EIF3FO00303 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3FO00303 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms