Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
AP3B1O00203 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.1■□□□□ 0.97
AP3B1O00203 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.1■□□□□ 0.97
AP3B1O00203 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
AP3B1O00203 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
AP3B1O00203 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
AP3B1O00203 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3B1O00203 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3B1O00203 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP3B1O00203 AC006128.1-201ENST00000624704 1661 ntBASIC21.09■□□□□ 0.97
AP3B1O00203 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.09■□□□□ 0.97
AP3B1O00203 AC105265.2-201ENST00000467189 838 ntBASIC21.09■□□□□ 0.97
AP3B1O00203 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.09■□□□□ 0.97
AP3B1O00203 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
AP3B1O00203 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AP3B1O00203 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.09■□□□□ 0.97
AP3B1O00203 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.09■□□□□ 0.97
AP3B1O00203 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP3B1O00203 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.08■□□□□ 0.97
AP3B1O00203 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.08■□□□□ 0.97
AP3B1O00203 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP3B1O00203 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.08■□□□□ 0.97
AP3B1O00203 AC121338.2-201ENST00000622535 1744 ntBASIC21.08■□□□□ 0.97
AP3B1O00203 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
AP3B1O00203 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
AP3B1O00203 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.08■□□□□ 0.96
AP3B1O00203 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
AP3B1O00203 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
AP3B1O00203 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
AP3B1O00203 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
AP3B1O00203 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.07■□□□□ 0.96
AP3B1O00203 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3B1O00203 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.07■□□□□ 0.96
AP3B1O00203 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP3B1O00203 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3B1O00203 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3B1O00203 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
AP3B1O00203 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.07■□□□□ 0.96
AP3B1O00203 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3B1O00203 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.07■□□□□ 0.96
AP3B1O00203 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3B1O00203 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP3B1O00203 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3B1O00203 LINC02228-203ENST00000641970 1355 ntBASIC21.07■□□□□ 0.96
AP3B1O00203 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
AP3B1O00203 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.07■□□□□ 0.96
AP3B1O00203 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3B1O00203 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3B1O00203 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3B1O00203 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AP3B1O00203 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.06■□□□□ 0.96
AP3B1O00203 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3B1O00203 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3B1O00203 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.06■□□□□ 0.96
AP3B1O00203 AC120498.10-201ENST00000621827 505 ntBASIC21.06■□□□□ 0.96
AP3B1O00203 MIR6084-201ENST00000622012 110 ntBASIC21.06■□□□□ 0.96
AP3B1O00203 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3B1O00203 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3B1O00203 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AP3B1O00203 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3B1O00203 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3B1O00203 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3B1O00203 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
AP3B1O00203 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.05■□□□□ 0.96
AP3B1O00203 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP3B1O00203 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP3B1O00203 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
AP3B1O00203 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP3B1O00203 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP3B1O00203 MIR638-201ENST00000385237 100 ntBASIC21.05■□□□□ 0.96
AP3B1O00203 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP3B1O00203 AC138907.5-202ENST00000569484 235 ntBASIC21.05■□□□□ 0.96
AP3B1O00203 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.05■□□□□ 0.96
AP3B1O00203 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP3B1O00203 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP3B1O00203 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP3B1O00203 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.04■□□□□ 0.96
AP3B1O00203 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3B1O00203 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
AP3B1O00203 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3B1O00203 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP3B1O00203 AC123595.1-201ENST00000440769 1046 ntBASIC21.04■□□□□ 0.96
AP3B1O00203 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.04■□□□□ 0.96
AP3B1O00203 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.04■□□□□ 0.96
AP3B1O00203 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3B1O00203 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.04■□□□□ 0.96
AP3B1O00203 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
AP3B1O00203 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
AP3B1O00203 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3B1O00203 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
AP3B1O00203 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3B1O00203 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP3B1O00203 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.03■□□□□ 0.96
AP3B1O00203 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP3B1O00203 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.03■□□□□ 0.96
AP3B1O00203 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP3B1O00203 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP3B1O00203 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
AP3B1O00203 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP3B1O00203 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms