Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPDYE4A6NLX3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPDYE4A6NLX3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.36■■□□□ 1.33
SPDYE4A6NLX3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SPDYE4A6NLX3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPDYE4A6NLX3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPDYE4A6NLX3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPDYE4A6NLX3 AC079630.1-202ENST00000618127 1840 ntBASIC23.36■■□□□ 1.33
SPDYE4A6NLX3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
SPDYE4A6NLX3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 HLA-L-209ENST00000420110 1011 ntBASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
SPDYE4A6NLX3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 AC080038.1-201ENST00000611274 1154 ntBASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SPDYE4A6NLX3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SPDYE4A6NLX3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SPDYE4A6NLX3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.32■■□□□ 1.32
SPDYE4A6NLX3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPDYE4A6NLX3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms