Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 AL391422.3-201ENST00000603791 2761 ntBASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 UNC93B8-201ENST00000511903 705 ntBASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
TRBV27A0A0K0K1C4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 AFG3L1P-217ENST00000557444 2447 ntBASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 AL162377.1-201ENST00000618844 1793 ntBASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV27A0A0K0K1C4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV27A0A0K0K1C4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms