Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 BID-204ENST00000399767 2129 ntTSL 2 BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 AC020763.4-201ENST00000623414 4170 ntBASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRAV22A0A0B4J277 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 NOC2LP1-202ENST00000452600 2235 ntBASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 AL592295.1-201ENST00000400984 884 ntBASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 AC093536.1-201ENST00000569153 554 ntBASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 TNXA-203ENST00000507684 2038 ntBASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC11.86□□□□□ -0.51
TRAV22A0A0B4J277 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 AC104564.3-201ENST00000582367 638 ntBASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC11.85□□□□□ -0.51
TRAV22A0A0B4J277 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms