Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.05■□□□□ -0
TRAV4A0A0B4J268 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV4A0A0B4J268 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV4A0A0B4J268 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.05■□□□□ -0
TRAV4A0A0B4J268 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV4A0A0B4J268 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV4A0A0B4J268 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 AC012414.1-201ENST00000556676 535 ntBASIC15.04■□□□□ -0
TRAV4A0A0B4J268 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV4A0A0B4J268 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 AC005229.4-201ENST00000610085 2198 ntBASIC15.03■□□□□ -0
TRAV4A0A0B4J268 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 AL358852.1-201ENST00000623174 1268 ntBASIC15.03■□□□□ -0
TRAV4A0A0B4J268 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV4A0A0B4J268 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV4A0A0B4J268 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV4A0A0B4J268 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV4A0A0B4J268 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV4A0A0B4J268 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV4A0A0B4J268 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
TRAV4A0A0B4J268 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV4A0A0B4J268 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV4A0A0B4J268 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV4A0A0B4J268 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV4A0A0B4J268 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms