Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 AC003957.1-201ENST00000625108 2673 ntBASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 KRT16P3-201ENST00000439127 1283 ntBASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-1A0A0A6YYK1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 RNF165-205ENST00000588679 2904 ntBASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TRAV8-1A0A0A6YYK1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 AP006587.3-201ENST00000525742 1516 ntBASIC15.84■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TRAV8-1A0A0A6YYK1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-1A0A0A6YYK1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms