Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 AC006128.1-201ENST00000624704 1661 ntBASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 AL020996.1-203ENST00000536896 2307 ntBASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 AC009299.2-201ENST00000482477 511 ntBASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 AC079089.2-201ENST00000531211 1277 ntBASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV2-28A0A075B6P5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
IGKV2-28A0A075B6P5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.77□□□□□ -0.21
IGKV2-28A0A075B6P5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms