Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CLCN6-202ENST00000346436 5583 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 ZEB2-217ENST00000470879 2648 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 MAST4-221ENST00000490016 1950 ntTSL 2 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 LIAS-203ENST00000381846 1578 ntTSL 3 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 LINC01837-205ENST00000635947 1557 ntTSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 ACSM5P1-201ENST00000566754 2438 ntBASIC10.92□□□□□ -0.66
LMO3Q8TAP4 L3MBTL2-201ENST00000216237 3296 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 MT2P1-201ENST00000262499 183 ntBASIC10.92□□□□□ -0.66
LMO3Q8TAP4 PRB4-201ENST00000279575 916 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 VN1R4-201ENST00000311170 1048 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 OR52I2-201ENST00000312614 1115 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 CRABP2-202ENST00000368221 783 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 AL137792.1-201ENST00000399029 557 ntBASIC10.92□□□□□ -0.66
LMO3Q8TAP4 TSPAN9-202ENST00000407263 956 ntTSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 LINC00378-201ENST00000413402 403 ntTSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 AL158207.1-201ENST00000417984 341 ntBASIC10.92□□□□□ -0.66
LMO3Q8TAP4 ZDHHC11-202ENST00000424784 943 ntTSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 RPL18AP7-201ENST00000435924 524 ntBASIC10.92□□□□□ -0.66
LMO3Q8TAP4 ESR1-208ENST00000443427 6357 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 AL450405.1-201ENST00000443998 474 ntBASIC10.92□□□□□ -0.66
LMO3Q8TAP4 E2F6P4-201ENST00000468625 514 ntBASIC10.92□□□□□ -0.66
LMO3Q8TAP4 AC007160.1-201ENST00000488095 319 ntBASIC10.92□□□□□ -0.66
LMO3Q8TAP4 PTPN20-222ENST00000509774 788 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 PTPN20-226ENST00000513156 913 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 AC026780.1-202ENST00000513812 572 ntTSL 2 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 AC023078.2-201ENST00000527164 988 ntBASIC10.92□□□□□ -0.66
LMO3Q8TAP4 COMMD9-206ENST00000532705 881 ntTSL 2 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 AP003721.4-201ENST00000544421 810 ntTSL 2 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 ARL2BP-202ENST00000562023 547 ntTSL 3 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 AC009119.1-203ENST00000565064 577 ntTSL 4 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 LINC00511-204ENST00000577828 538 ntTSL 3 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 MAGOH2P-201ENST00000580926 436 ntBASIC10.92□□□□□ -0.66
LMO3Q8TAP4 HKR1-219ENST00000591134 547 ntTSL 2 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 FAM205C-202ENST00000603592 468 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 HIST1H2BB-201ENST00000615966 381 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 OR52I2-202ENST00000641486 1115 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 NR4A2-201ENST00000339562 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 PNPLA1-202ENST00000388715 2332 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 ERICH3-201ENST00000326665 7159 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 RARB-201ENST00000330688 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 LINC02006-202ENST00000492569 1958 ntTSL 2 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 SLC22A14-201ENST00000273173 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 PKP1-202ENST00000352845 2244 ntTSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 ALDH7A1-231ENST00000637206 2466 ntTSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 TADA2A-205ENST00000615182 4253 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 HIST1H3G-201ENST00000614378 2411 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 APOBEC3F-201ENST00000308521 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LMO3Q8TAP4 ARHGAP25-202ENST00000409202 2945 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AHCYL2-210ENST00000490911 1884 ntAPPRIS ALT1 TSL 2 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 GLP2R-201ENST00000262441 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 GRM3-201ENST00000361669 4268 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 CREM-205ENST00000348787 1821 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 CHMP2B-203ENST00000471660 2528 ntTSL 2 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 SULF2-206ENST00000467815 3905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 ZP2-203ENST00000574002 2749 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 ITGAE-201ENST00000263087 3858 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 RBFOX1-202ENST00000340209 4099 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 RSBN1L-203ENST00000445288 2667 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 MYH10-202ENST00000360416 7762 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AURKC-201ENST00000302804 1247 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 ENSA-202ENST00000339643 633 ntTSL 2 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 PADI1-201ENST00000375471 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 ROBO2P1-201ENST00000422054 288 ntBASIC10.91□□□□□ -0.66
LMO3Q8TAP4 CD24P1-201ENST00000422383 225 ntBASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AL450311.2-201ENST00000428753 503 ntTSL 3 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AL139260.1-201ENST00000433671 630 ntTSL 3 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 APCDD1L-AS1-205ENST00000439558 648 ntTSL 5 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 ZFYVE9P2-201ENST00000447321 604 ntBASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AL390778.1-201ENST00000452377 527 ntTSL 3 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 RN7SL683P-201ENST00000460552 270 ntBASIC10.91□□□□□ -0.66
LMO3Q8TAP4 RPL12P33-201ENST00000485633 492 ntBASIC10.91□□□□□ -0.66
LMO3Q8TAP4 RN7SL679P-201ENST00000497096 304 ntBASIC10.91□□□□□ -0.66
LMO3Q8TAP4 LINC02409-201ENST00000547515 576 ntTSL 4 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 PPP2R5C-212ENST00000554442 800 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 MAX-213ENST00000556443 585 ntTSL 2 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 STX1B-202ENST00000565419 834 ntTSL 2 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AC073476.2-201ENST00000569668 497 ntBASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AC100791.2-201ENST00000570512 607 ntTSL 5 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 U91319.1-201ENST00000571619 764 ntTSL 3 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 FAM95B1-213ENST00000593047 767 ntTSL 5 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AL138966.1-201ENST00000603212 313 ntBASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AC117498.3-201ENST00000605409 511 ntBASIC10.91□□□□□ -0.66
LMO3Q8TAP4 BBIP1-210ENST00000605742 569 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AC020728.1-201ENST00000605749 1216 ntBASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AC091544.6-201ENST00000607766 446 ntTSL 5 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 SPRY4-IT1_1.1-201ENST00000611334 91 ntBASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AC027348.1-201ENST00000615979 615 ntBASIC10.91□□□□□ -0.66
LMO3Q8TAP4 LINC00694-203ENST00000636468 808 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 BMS1P4-203ENST00000580790 1913 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
LMO3Q8TAP4 AL162293.1-201ENST00000373508 2112 ntTSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms