Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AL020996.1-203ENST00000536896 2307 ntBASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 AL031602.1-201ENST00000633169 911 ntBASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGB1Q9Y5G3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 MIR4787-201ENST00000607364 84 ntBASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 OR7E47P-201ENST00000546390 1422 ntBASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHGB1Q9Y5G3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGB1Q9Y5G3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.14■□□□□ 0.66
PCDHGB1Q9Y5G3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGB1Q9Y5G3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.14■□□□□ 0.66
PCDHGB1Q9Y5G3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PCDHGB1Q9Y5G3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHGB1Q9Y5G3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGB1Q9Y5G3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB1Q9Y5G3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB1Q9Y5G3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHGB1Q9Y5G3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB1Q9Y5G3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB1Q9Y5G3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 AC241377.3-202ENST00000626088 1088 ntBASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 AC241585.3-202ENST00000628937 1088 ntBASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 AC245100.8-202ENST00000629247 1058 ntBASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 AC068587.7-201ENST00000641602 218 ntBASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHGB1Q9Y5G3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 MIR638-201ENST00000385237 100 ntBASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 KRT16P3-201ENST00000439127 1283 ntBASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
PCDHGB1Q9Y5G3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms