Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 KRT19P1-201ENST00000405746 1186 ntBASIC21.05■□□□□ 0.96
PKP3Q9Y446 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.05■□□□□ 0.96
PKP3Q9Y446 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.05■□□□□ 0.96
PKP3Q9Y446 NTF6G-201ENST00000591094 616 ntBASIC21.05■□□□□ 0.96
PKP3Q9Y446 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.05■□□□□ 0.96
PKP3Q9Y446 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKP3Q9Y446 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.05■□□□□ 0.96
PKP3Q9Y446 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PKP3Q9Y446 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.05■□□□□ 0.96
PKP3Q9Y446 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PKP3Q9Y446 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PKP3Q9Y446 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP3Q9Y446 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP3Q9Y446 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.04■□□□□ 0.96
PKP3Q9Y446 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP3Q9Y446 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP3Q9Y446 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP3Q9Y446 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
PKP3Q9Y446 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
PKP3Q9Y446 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.04■□□□□ 0.96
PKP3Q9Y446 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.04■□□□□ 0.96
PKP3Q9Y446 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.04■□□□□ 0.96
PKP3Q9Y446 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PKP3Q9Y446 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP3Q9Y446 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP3Q9Y446 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.04■□□□□ 0.96
PKP3Q9Y446 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.03■□□□□ 0.96
PKP3Q9Y446 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.03■□□□□ 0.96
PKP3Q9Y446 POU5F1P4-201ENST00000413175 1085 ntBASIC21.03■□□□□ 0.96
PKP3Q9Y446 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.03■□□□□ 0.96
PKP3Q9Y446 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKP3Q9Y446 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.03■□□□□ 0.96
PKP3Q9Y446 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PKP3Q9Y446 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.03■□□□□ 0.96
PKP3Q9Y446 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKP3Q9Y446 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PKP3Q9Y446 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PKP3Q9Y446 AC010141.2-201ENST00000452426 721 ntBASIC21.02■□□□□ 0.96
PKP3Q9Y446 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.02■□□□□ 0.96
PKP3Q9Y446 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.02■□□□□ 0.96
PKP3Q9Y446 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PKP3Q9Y446 AP001160.3-201ENST00000601484 763 ntBASIC21.02■□□□□ 0.96
PKP3Q9Y446 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PKP3Q9Y446 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PKP3Q9Y446 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKP3Q9Y446 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PKP3Q9Y446 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.02■□□□□ 0.96
PKP3Q9Y446 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PKP3Q9Y446 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKP3Q9Y446 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKP3Q9Y446 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PKP3Q9Y446 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PKP3Q9Y446 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PKP3Q9Y446 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP3Q9Y446 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP3Q9Y446 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP3Q9Y446 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP3Q9Y446 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.01■□□□□ 0.95
PKP3Q9Y446 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.01■□□□□ 0.95
PKP3Q9Y446 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP3Q9Y446 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PKP3Q9Y446 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PKP3Q9Y446 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP3Q9Y446 AC120498.10-201ENST00000621827 505 ntBASIC21.01■□□□□ 0.95
PKP3Q9Y446 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.01■□□□□ 0.95
PKP3Q9Y446 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
PKP3Q9Y446 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PKP3Q9Y446 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21■□□□□ 0.95
PKP3Q9Y446 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PKP3Q9Y446 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PKP3Q9Y446 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21■□□□□ 0.95
PKP3Q9Y446 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21■□□□□ 0.95
PKP3Q9Y446 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PKP3Q9Y446 AC026310.3-201ENST00000625186 2373 ntBASIC21■□□□□ 0.95
PKP3Q9Y446 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PKP3Q9Y446 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
PKP3Q9Y446 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21■□□□□ 0.95
PKP3Q9Y446 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21■□□□□ 0.95
PKP3Q9Y446 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21■□□□□ 0.95
PKP3Q9Y446 ANKRD20A6P-201ENST00000618763 204 ntBASIC21■□□□□ 0.95
PKP3Q9Y446 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PKP3Q9Y446 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PKP3Q9Y446 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21■□□□□ 0.95
PKP3Q9Y446 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.99■□□□□ 0.95
PKP3Q9Y446 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PKP3Q9Y446 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PKP3Q9Y446 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PKP3Q9Y446 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PKP3Q9Y446 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PKP3Q9Y446 AC061975.6-201ENST00000579045 1553 ntBASIC20.99■□□□□ 0.95
PKP3Q9Y446 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PKP3Q9Y446 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PKP3Q9Y446 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PKP3Q9Y446 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.99■□□□□ 0.95
PKP3Q9Y446 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PKP3Q9Y446 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PKP3Q9Y446 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.99■□□□□ 0.95
PKP3Q9Y446 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.99■□□□□ 0.95
PKP3Q9Y446 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PKP3Q9Y446 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms