Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH1Q9Y2L9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH1Q9Y2L9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH1Q9Y2L9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH1Q9Y2L9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH1Q9Y2L9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH1Q9Y2L9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH1Q9Y2L9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 LONRF2P2-201ENST00000439212 571 ntBASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 KRT8P33-201ENST00000508125 1423 ntBASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 AC004408.2-201ENST00000623613 2777 ntBASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH1Q9Y2L9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 PVT1_1.1-201ENST00000615125 194 ntBASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH1Q9Y2L9 AC112907.3-201ENST00000577781 2400 ntBASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH1Q9Y2L9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.86■□□□□ 0.77
LRCH1Q9Y2L9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH1Q9Y2L9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH1Q9Y2L9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH1Q9Y2L9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.86■□□□□ 0.77
LRCH1Q9Y2L9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH1Q9Y2L9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH1Q9Y2L9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH1Q9Y2L9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH1Q9Y2L9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH1Q9Y2L9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 AC026471.6-201ENST00000622954 1905 ntBASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 AC103834.1-201ENST00000520383 144 ntBASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 AC027702.1-201ENST00000563810 1770 ntBASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH1Q9Y2L9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 AC022616.5-201ENST00000518796 181 ntBASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LRCH1Q9Y2L9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms