Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 RNA5SP413-201ENST00000516373 109 ntBASIC20.43■□□□□ 0.86
SATB2Q9UPW6 AC079089.2-201ENST00000531211 1277 ntBASIC20.43■□□□□ 0.86
SATB2Q9UPW6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 AC008687.6-201ENST00000596318 630 ntBASIC20.43■□□□□ 0.86
SATB2Q9UPW6 ECEL1P1-201ENST00000373592 1742 ntBASIC20.43■□□□□ 0.86
SATB2Q9UPW6 AC087742.1-201ENST00000575880 1738 ntBASIC20.43■□□□□ 0.86
SATB2Q9UPW6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 AC242852.2-201ENST00000615738 1807 ntBASIC20.43■□□□□ 0.86
SATB2Q9UPW6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 RNF165-205ENST00000588679 2904 ntBASIC20.43■□□□□ 0.86
SATB2Q9UPW6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SATB2Q9UPW6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 POU5F1P3-201ENST00000428824 1078 ntBASIC20.42■□□□□ 0.86
SATB2Q9UPW6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.42■□□□□ 0.86
SATB2Q9UPW6 LINC01960-201ENST00000563759 1884 ntBASIC20.41■□□□□ 0.86
SATB2Q9UPW6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 CYP2T1P-201ENST00000432607 1285 ntBASIC20.41■□□□□ 0.86
SATB2Q9UPW6 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.41■□□□□ 0.86
SATB2Q9UPW6 TERF1P5-201ENST00000477545 1207 ntBASIC20.41■□□□□ 0.86
SATB2Q9UPW6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SATB2Q9UPW6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 MKRN4P-201ENST00000444706 1521 ntBASIC20.4■□□□□ 0.86
SATB2Q9UPW6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SATB2Q9UPW6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SATB2Q9UPW6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SATB2Q9UPW6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SATB2Q9UPW6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SATB2Q9UPW6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SATB2Q9UPW6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SATB2Q9UPW6 AC068338.2-201ENST00000563278 1430 ntBASIC20.39■□□□□ 0.85
SATB2Q9UPW6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SATB2Q9UPW6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SATB2Q9UPW6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.39■□□□□ 0.85
SATB2Q9UPW6 KRT18P29-201ENST00000397031 1267 ntBASIC20.39■□□□□ 0.85
SATB2Q9UPW6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.39■□□□□ 0.85
SATB2Q9UPW6 MIPEPP3-201ENST00000412105 444 ntBASIC20.39■□□□□ 0.85
SATB2Q9UPW6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SATB2Q9UPW6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SATB2Q9UPW6 ITM2C-210ENST00000620962 501 ntBASIC20.39■□□□□ 0.85
SATB2Q9UPW6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.39■□□□□ 0.85
SATB2Q9UPW6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SATB2Q9UPW6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SATB2Q9UPW6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SATB2Q9UPW6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SATB2Q9UPW6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms