Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 KRT18P35-201ENST00000510488 1269 ntBASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ZC3H4Q9UPT8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.58■■□□□ 1.69
ZC3H4Q9UPT8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
ZC3H4Q9UPT8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
ZC3H4Q9UPT8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
ZC3H4Q9UPT8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.57■■□□□ 1.68
ZC3H4Q9UPT8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ZC3H4Q9UPT8 TMPOP1-202ENST00000424642 1267 ntBASIC25.57■■□□□ 1.68
ZC3H4Q9UPT8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.57■■□□□ 1.68
ZC3H4Q9UPT8 AC133681.1-201ENST00000465482 601 ntBASIC25.57■■□□□ 1.68
ZC3H4Q9UPT8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.57■■□□□ 1.68
ZC3H4Q9UPT8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.57■■□□□ 1.68
ZC3H4Q9UPT8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3H4Q9UPT8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZC3H4Q9UPT8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
ZC3H4Q9UPT8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZC3H4Q9UPT8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZC3H4Q9UPT8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ZC3H4Q9UPT8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
ZC3H4Q9UPT8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC25.55■■□□□ 1.68
ZC3H4Q9UPT8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.55■■□□□ 1.68
ZC3H4Q9UPT8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ZC3H4Q9UPT8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
ZC3H4Q9UPT8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H4Q9UPT8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H4Q9UPT8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H4Q9UPT8 LINC01960-201ENST00000563759 1884 ntBASIC25.54■■□□□ 1.68
ZC3H4Q9UPT8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H4Q9UPT8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H4Q9UPT8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
ZC3H4Q9UPT8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC25.54■■□□□ 1.68
ZC3H4Q9UPT8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3H4Q9UPT8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC25.54■■□□□ 1.68
ZC3H4Q9UPT8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.54■■□□□ 1.68
ZC3H4Q9UPT8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 MCRIP2P1-201ENST00000394346 511 ntBASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3H4Q9UPT8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
ZC3H4Q9UPT8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.52■■□□□ 1.68
ZC3H4Q9UPT8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZC3H4Q9UPT8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZC3H4Q9UPT8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms