Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
UBQLN1Q9UMX0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UBQLN1Q9UMX0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 CYP2T1P-201ENST00000432607 1285 ntBASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 AC104771.1-201ENST00000603335 964 ntBASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 AL109923.1-201ENST00000618799 583 ntBASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN1Q9UMX0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 AC083906.2-201ENST00000511578 360 ntBASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 AC133552.2-202ENST00000575694 574 ntBASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBQLN1Q9UMX0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 AL162412.1-201ENST00000567129 965 ntBASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 AL591742.1-201ENST00000604433 565 ntBASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
UBQLN1Q9UMX0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
UBQLN1Q9UMX0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 AF201337.1-201ENST00000520239 748 ntBASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBQLN1Q9UMX0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms