Protein–RNA interactions for Protein: Q9UKG1

APPL1, DCC-interacting protein 13-alpha, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1Q9UKG1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APPL1Q9UKG1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPL1Q9UKG1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 AC244015.2-201ENST00000616358 1861 ntBASIC21.16■□□□□ 0.98
APPL1Q9UKG1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 AC079140.4-201ENST00000507448 529 ntBASIC21.16■□□□□ 0.98
APPL1Q9UKG1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.16■□□□□ 0.98
APPL1Q9UKG1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 KRT18P61-201ENST00000585825 1298 ntBASIC21.15■□□□□ 0.98
APPL1Q9UKG1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
APPL1Q9UKG1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.98
APPL1Q9UKG1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
APPL1Q9UKG1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
APPL1Q9UKG1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
APPL1Q9UKG1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.14■□□□□ 0.98
APPL1Q9UKG1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
APPL1Q9UKG1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
APPL1Q9UKG1 AC006015.1-201ENST00000429970 570 ntBASIC21.14■□□□□ 0.97
APPL1Q9UKG1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.14■□□□□ 0.97
APPL1Q9UKG1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
APPL1Q9UKG1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
APPL1Q9UKG1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
APPL1Q9UKG1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
APPL1Q9UKG1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
APPL1Q9UKG1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
APPL1Q9UKG1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
APPL1Q9UKG1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
APPL1Q9UKG1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
APPL1Q9UKG1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.13■□□□□ 0.97
APPL1Q9UKG1 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.13■□□□□ 0.97
APPL1Q9UKG1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APPL1Q9UKG1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APPL1Q9UKG1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
APPL1Q9UKG1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
APPL1Q9UKG1 AP004607.4-201ENST00000530158 1459 ntBASIC21.13■□□□□ 0.97
APPL1Q9UKG1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APPL1Q9UKG1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APPL1Q9UKG1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
APPL1Q9UKG1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APPL1Q9UKG1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
APPL1Q9UKG1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APPL1Q9UKG1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
APPL1Q9UKG1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.12■□□□□ 0.97
APPL1Q9UKG1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
APPL1Q9UKG1 KRT87P-202ENST00000534226 1464 ntBASIC21.12■□□□□ 0.97
APPL1Q9UKG1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.12■□□□□ 0.97
APPL1Q9UKG1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.12■□□□□ 0.97
APPL1Q9UKG1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
APPL1Q9UKG1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.12■□□□□ 0.97
APPL1Q9UKG1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
APPL1Q9UKG1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
APPL1Q9UKG1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
APPL1Q9UKG1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APPL1Q9UKG1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms