Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 AC105036.2-201ENST00000569468 176 ntBASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE7Q9UBL6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 GUSBP6-202ENST00000438529 1198 ntBASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE7Q9UBL6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 SLC29A4P1-201ENST00000398760 971 ntBASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 AL591742.1-201ENST00000604433 565 ntBASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 AC008694.1-202ENST00000636953 945 ntBASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CPNE7Q9UBL6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE7Q9UBL6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE7Q9UBL6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE7Q9UBL6 AC012676.1-201ENST00000574705 1949 ntBASIC20.33■□□□□ 0.85
CPNE7Q9UBL6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE7Q9UBL6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE7Q9UBL6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE7Q9UBL6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE7Q9UBL6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE7Q9UBL6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE7Q9UBL6 AC069236.1-201ENST00000604339 616 ntBASIC20.33■□□□□ 0.85
CPNE7Q9UBL6 OR10C1-204ENST00000622521 1039 ntBASIC20.33■□□□□ 0.85
CPNE7Q9UBL6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE7Q9UBL6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE7Q9UBL6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.33■□□□□ 0.84
CPNE7Q9UBL6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE7Q9UBL6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE7Q9UBL6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE7Q9UBL6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE7Q9UBL6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 AL117328.2-201ENST00000624617 1940 ntBASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 AC245052.3-201ENST00000450182 901 ntBASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 AL162412.1-201ENST00000567129 965 ntBASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 AC142086.2-201ENST00000569753 217 ntBASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CPNE7Q9UBL6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms