Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.25■□□□□ 0.67
LRFN1Q9P244 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN1Q9P244 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN1Q9P244 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN1Q9P244 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.25■□□□□ 0.67
LRFN1Q9P244 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.25■□□□□ 0.67
LRFN1Q9P244 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.25■□□□□ 0.67
LRFN1Q9P244 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.25■□□□□ 0.67
LRFN1Q9P244 AC069236.1-201ENST00000604339 616 ntBASIC19.25■□□□□ 0.67
LRFN1Q9P244 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.25■□□□□ 0.67
LRFN1Q9P244 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
LRFN1Q9P244 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRFN1Q9P244 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.25■□□□□ 0.67
LRFN1Q9P244 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.24■□□□□ 0.67
LRFN1Q9P244 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
LRFN1Q9P244 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LRFN1Q9P244 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.24■□□□□ 0.67
LRFN1Q9P244 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 AL138781.1-201ENST00000566567 1274 ntBASIC19.24■□□□□ 0.67
LRFN1Q9P244 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.24■□□□□ 0.67
LRFN1Q9P244 OR10C1-204ENST00000622521 1039 ntBASIC19.24■□□□□ 0.67
LRFN1Q9P244 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.24■□□□□ 0.67
LRFN1Q9P244 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LRFN1Q9P244 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.24■□□□□ 0.67
LRFN1Q9P244 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRFN1Q9P244 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.24■□□□□ 0.67
LRFN1Q9P244 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.24■□□□□ 0.67
LRFN1Q9P244 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRFN1Q9P244 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.23■□□□□ 0.67
LRFN1Q9P244 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRFN1Q9P244 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.23■□□□□ 0.67
LRFN1Q9P244 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.23■□□□□ 0.67
LRFN1Q9P244 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.23■□□□□ 0.67
LRFN1Q9P244 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRFN1Q9P244 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.23■□□□□ 0.67
LRFN1Q9P244 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.23■□□□□ 0.67
LRFN1Q9P244 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.23■□□□□ 0.67
LRFN1Q9P244 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
LRFN1Q9P244 AC243732.1-201ENST00000612648 864 ntBASIC19.23■□□□□ 0.67
LRFN1Q9P244 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.23■□□□□ 0.67
LRFN1Q9P244 AC233723.2-201ENST00000623798 2106 ntBASIC19.23■□□□□ 0.67
LRFN1Q9P244 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRFN1Q9P244 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRFN1Q9P244 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRFN1Q9P244 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN1Q9P244 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.22■□□□□ 0.67
LRFN1Q9P244 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.22■□□□□ 0.67
LRFN1Q9P244 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN1Q9P244 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.22■□□□□ 0.67
LRFN1Q9P244 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN1Q9P244 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN1Q9P244 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN1Q9P244 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN1Q9P244 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LRFN1Q9P244 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
LRFN1Q9P244 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.22■□□□□ 0.67
LRFN1Q9P244 AL591742.1-201ENST00000604433 565 ntBASIC19.22■□□□□ 0.67
LRFN1Q9P244 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.22■□□□□ 0.67
LRFN1Q9P244 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN1Q9P244 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN1Q9P244 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LRFN1Q9P244 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRFN1Q9P244 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN1Q9P244 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.21■□□□□ 0.67
LRFN1Q9P244 MKRN4P-201ENST00000444706 1521 ntBASIC19.21■□□□□ 0.67
LRFN1Q9P244 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LRFN1Q9P244 GUSBP5-202ENST00000510805 1989 ntBASIC19.21■□□□□ 0.67
LRFN1Q9P244 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN1Q9P244 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN1Q9P244 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.21■□□□□ 0.67
LRFN1Q9P244 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN1Q9P244 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LRFN1Q9P244 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN1Q9P244 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.21■□□□□ 0.67
LRFN1Q9P244 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN1Q9P244 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
LRFN1Q9P244 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LRFN1Q9P244 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN1Q9P244 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN1Q9P244 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN1Q9P244 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN1Q9P244 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN1Q9P244 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRFN1Q9P244 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LRFN1Q9P244 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN1Q9P244 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN1Q9P244 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN1Q9P244 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms