Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.81■□□□□ 0.76
VAPAQ9P0L0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 BX842568.3-201ENST00000418104 571 ntBASIC19.8■□□□□ 0.76
VAPAQ9P0L0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
VAPAQ9P0L0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VAPAQ9P0L0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 MIR4767-201ENST00000582827 78 ntBASIC19.78■□□□□ 0.76
VAPAQ9P0L0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VAPAQ9P0L0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VAPAQ9P0L0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VAPAQ9P0L0 AC121338.2-201ENST00000622535 1744 ntBASIC19.77■□□□□ 0.76
VAPAQ9P0L0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.77■□□□□ 0.76
VAPAQ9P0L0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VAPAQ9P0L0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
VAPAQ9P0L0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.77■□□□□ 0.76
VAPAQ9P0L0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
VAPAQ9P0L0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.77■□□□□ 0.76
VAPAQ9P0L0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VAPAQ9P0L0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
VAPAQ9P0L0 AL391422.3-201ENST00000603791 2761 ntBASIC19.77■□□□□ 0.75
VAPAQ9P0L0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 AC055733.4-201ENST00000638462 1354 ntBASIC19.76■□□□□ 0.75
VAPAQ9P0L0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms