Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
MKS1Q9NXB0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.72■□□□□ 0.91
MKS1Q9NXB0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.72■□□□□ 0.91
MKS1Q9NXB0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MKS1Q9NXB0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.72■□□□□ 0.91
MKS1Q9NXB0 AL162377.1-201ENST00000618844 1793 ntBASIC20.72■□□□□ 0.91
MKS1Q9NXB0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.72■□□□□ 0.91
MKS1Q9NXB0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MKS1Q9NXB0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.71■□□□□ 0.91
MKS1Q9NXB0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MKS1Q9NXB0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.7■□□□□ 0.91
MKS1Q9NXB0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
MKS1Q9NXB0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MKS1Q9NXB0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 AL035685.1-201ENST00000636663 812 ntBASIC20.69■□□□□ 0.9
MKS1Q9NXB0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 AC055733.4-201ENST00000638462 1354 ntBASIC20.69■□□□□ 0.9
MKS1Q9NXB0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
MKS1Q9NXB0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 AC009237.3-201ENST00000393279 1427 ntBASIC20.68■□□□□ 0.9
MKS1Q9NXB0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MKS1Q9NXB0 BX005040.4-201ENST00000637145 1518 ntBASIC20.68■□□□□ 0.9
MKS1Q9NXB0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
MKS1Q9NXB0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms