Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 AC061975.6-201ENST00000579045 1553 ntBASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CUEDC1Q9NWM3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CUEDC1Q9NWM3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.27■□□□□ 0.83
CUEDC1Q9NWM3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CUEDC1Q9NWM3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CUEDC1Q9NWM3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 AC007375.3-201ENST00000600936 2314 ntBASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 KRT19P1-201ENST00000405746 1186 ntBASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CUEDC1Q9NWM3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 AC026310.3-201ENST00000625186 2373 ntBASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CUEDC1Q9NWM3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CUEDC1Q9NWM3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.23■□□□□ 0.83
CUEDC1Q9NWM3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CUEDC1Q9NWM3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CUEDC1Q9NWM3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
CUEDC1Q9NWM3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CUEDC1Q9NWM3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CUEDC1Q9NWM3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CUEDC1Q9NWM3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CUEDC1Q9NWM3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CUEDC1Q9NWM3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.23■□□□□ 0.83
CUEDC1Q9NWM3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 SLC7A5P2-201ENST00000553010 536 ntBASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 AC008175.2-201ENST00000612840 297 ntBASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.22■□□□□ 0.83
CUEDC1Q9NWM3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 AL024507.2-201ENST00000606070 2574 ntBASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms