Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.68■□□□□ 0.74
ZCCHC3Q9NUD5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZCCHC3Q9NUD5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.68■□□□□ 0.74
ZCCHC3Q9NUD5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZCCHC3Q9NUD5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ZCCHC3Q9NUD5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
ZCCHC3Q9NUD5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.66■□□□□ 0.74
ZCCHC3Q9NUD5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZCCHC3Q9NUD5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZCCHC3Q9NUD5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZCCHC3Q9NUD5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZCCHC3Q9NUD5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.66■□□□□ 0.74
ZCCHC3Q9NUD5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZCCHC3Q9NUD5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZCCHC3Q9NUD5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZCCHC3Q9NUD5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ZCCHC3Q9NUD5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZCCHC3Q9NUD5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZCCHC3Q9NUD5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZCCHC3Q9NUD5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.65■□□□□ 0.74
ZCCHC3Q9NUD5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZCCHC3Q9NUD5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZCCHC3Q9NUD5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZCCHC3Q9NUD5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZCCHC3Q9NUD5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZCCHC3Q9NUD5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZCCHC3Q9NUD5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 AC079140.4-201ENST00000507448 529 ntBASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 EEF1DP3-203ENST00000566025 782 ntBASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 AC053503.5-201ENST00000601508 636 ntBASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ZCCHC3Q9NUD5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 AC027612.3-201ENST00000413684 1047 ntBASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZCCHC3Q9NUD5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZCCHC3Q9NUD5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms