Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 KRT16P2-201ENST00000414673 1423 ntBASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
ECHDC1Q9NTX5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ECHDC1Q9NTX5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
ECHDC1Q9NTX5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.61■■□□□ 1.69
ECHDC1Q9NTX5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ECHDC1Q9NTX5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
ECHDC1Q9NTX5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ECHDC1Q9NTX5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.61■■□□□ 1.69
ECHDC1Q9NTX5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ECHDC1Q9NTX5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ECHDC1Q9NTX5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ECHDC1Q9NTX5 CLDN5-201ENST00000403084 2357 ntBASIC25.6■■□□□ 1.69
ECHDC1Q9NTX5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ECHDC1Q9NTX5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
ECHDC1Q9NTX5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ECHDC1Q9NTX5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.6■■□□□ 1.69
ECHDC1Q9NTX5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.6■■□□□ 1.69
ECHDC1Q9NTX5 AC120498.10-201ENST00000621827 505 ntBASIC25.6■■□□□ 1.69
ECHDC1Q9NTX5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ECHDC1Q9NTX5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ECHDC1Q9NTX5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
ECHDC1Q9NTX5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ECHDC1Q9NTX5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 UBE2DNL-204ENST00000602536 740 ntBASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
ECHDC1Q9NTX5 AF106564.1-201ENST00000607058 2553 ntBASIC25.58■■□□□ 1.69
ECHDC1Q9NTX5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ECHDC1Q9NTX5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ECHDC1Q9NTX5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ECHDC1Q9NTX5 AC137761.2-201ENST00000561729 223 ntBASIC25.58■■□□□ 1.69
ECHDC1Q9NTX5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.58■■□□□ 1.69
ECHDC1Q9NTX5 AC145350.3-201ENST00000569033 163 ntBASIC25.58■■□□□ 1.69
ECHDC1Q9NTX5 AC022517.1-201ENST00000592429 346 ntBASIC25.58■■□□□ 1.69
ECHDC1Q9NTX5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.58■■□□□ 1.69
ECHDC1Q9NTX5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
ECHDC1Q9NTX5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
ECHDC1Q9NTX5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
ECHDC1Q9NTX5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ECHDC1Q9NTX5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ECHDC1Q9NTX5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.57■■□□□ 1.68
ECHDC1Q9NTX5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.57■■□□□ 1.68
ECHDC1Q9NTX5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.57■■□□□ 1.68
ECHDC1Q9NTX5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.57■■□□□ 1.68
ECHDC1Q9NTX5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.57■■□□□ 1.68
ECHDC1Q9NTX5 SLC7A5P1-201ENST00000568957 537 ntBASIC25.57■■□□□ 1.68
ECHDC1Q9NTX5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.57■■□□□ 1.68
ECHDC1Q9NTX5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
ECHDC1Q9NTX5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ECHDC1Q9NTX5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
ECHDC1Q9NTX5 AC006015.1-201ENST00000429970 570 ntBASIC25.55■■□□□ 1.68
ECHDC1Q9NTX5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.55■■□□□ 1.68
ECHDC1Q9NTX5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC25.55■■□□□ 1.68
ECHDC1Q9NTX5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.55■■□□□ 1.68
ECHDC1Q9NTX5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.55■■□□□ 1.68
ECHDC1Q9NTX5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ECHDC1Q9NTX5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ECHDC1Q9NTX5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ECHDC1Q9NTX5 AL049796.1-201ENST00000565336 1766 ntBASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 MYCNOS-205ENST00000641950 531 ntBASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms