Protein–RNA interactions for Protein: Q9HC58

SLC24A3, Sodium/potassium/calcium exchanger 3, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A3Q9HC58 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 AC005082.1-201ENST00000413042 2259 ntBASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 AC010542.4-201ENST00000563151 1910 ntBASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC24A3Q9HC58 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 AC018445.3-201ENST00000624177 1945 ntBASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 AC079416.2-201ENST00000625035 1193 ntBASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC24A3Q9HC58 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 AC091305.1-201ENST00000479476 895 ntBASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SLC24A3Q9HC58 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SLC24A3Q9HC58 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SLC24A3Q9HC58 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 AC105265.2-201ENST00000467189 838 ntBASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 SYT6-210ENST00000641643 1587 ntBASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC24A3Q9HC58 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms