Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VRTNQ9H8Y1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.42■■□□□ 1.18
VRTNQ9H8Y1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VRTNQ9H8Y1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.42■■□□□ 1.18
VRTNQ9H8Y1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 RBM17P2-201ENST00000616397 1405 ntBASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 AC004911.1-201ENST00000416316 871 ntBASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 DUX4L16-201ENST00000555130 1264 ntBASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 RARRES2P11-201ENST00000635158 484 ntBASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VRTNQ9H8Y1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VRTNQ9H8Y1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
VRTNQ9H8Y1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
VRTNQ9H8Y1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
VRTNQ9H8Y1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
VRTNQ9H8Y1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VRTNQ9H8Y1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.39■■□□□ 1.17
VRTNQ9H8Y1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VRTNQ9H8Y1 TERF1P5-201ENST00000477545 1207 ntBASIC22.39■■□□□ 1.17
VRTNQ9H8Y1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.39■■□□□ 1.17
VRTNQ9H8Y1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
VRTNQ9H8Y1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VRTNQ9H8Y1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.39■■□□□ 1.17
VRTNQ9H8Y1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
VRTNQ9H8Y1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
VRTNQ9H8Y1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.38■■□□□ 1.17
VRTNQ9H8Y1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VRTNQ9H8Y1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.38■■□□□ 1.17
VRTNQ9H8Y1 AC007322.4-201ENST00000509611 723 ntBASIC22.38■■□□□ 1.17
VRTNQ9H8Y1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
VRTNQ9H8Y1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
VRTNQ9H8Y1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VRTNQ9H8Y1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 RAP2CP1-201ENST00000605103 478 ntBASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 AC080038.1-201ENST00000611274 1154 ntBASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VRTNQ9H8Y1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 AC245052.3-201ENST00000450182 901 ntBASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VRTNQ9H8Y1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 CNN2P6-201ENST00000439038 900 ntBASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 CDCA4P2-201ENST00000441182 718 ntBASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 AC013268.1-206ENST00000638368 961 ntBASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms