Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS16Q9H269 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
VPS16Q9H269 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
VPS16Q9H269 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS16Q9H269 AC092667.1-201ENST00000434301 2586 ntBASIC23■■□□□ 1.27
VPS16Q9H269 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS16Q9H269 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
VPS16Q9H269 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23■■□□□ 1.27
VPS16Q9H269 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23■■□□□ 1.27
VPS16Q9H269 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
VPS16Q9H269 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23■■□□□ 1.27
VPS16Q9H269 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
VPS16Q9H269 AC055733.4-201ENST00000638462 1354 ntBASIC23■■□□□ 1.27
VPS16Q9H269 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS16Q9H269 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23■■□□□ 1.27
VPS16Q9H269 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS16Q9H269 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS16Q9H269 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS16Q9H269 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS16Q9H269 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS16Q9H269 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.99■■□□□ 1.27
VPS16Q9H269 AC099791.1-201ENST00000416440 715 ntBASIC22.99■■□□□ 1.27
VPS16Q9H269 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.99■■□□□ 1.27
VPS16Q9H269 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.99■■□□□ 1.27
VPS16Q9H269 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.99■■□□□ 1.27
VPS16Q9H269 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.99■■□□□ 1.27
VPS16Q9H269 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
VPS16Q9H269 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.99■■□□□ 1.27
VPS16Q9H269 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS16Q9H269 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
VPS16Q9H269 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS16Q9H269 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
VPS16Q9H269 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.99■■□□□ 1.27
VPS16Q9H269 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS16Q9H269 AC009237.3-201ENST00000393279 1427 ntBASIC22.99■■□□□ 1.27
VPS16Q9H269 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
VPS16Q9H269 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
VPS16Q9H269 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS16Q9H269 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS16Q9H269 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS16Q9H269 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS16Q9H269 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.98■■□□□ 1.27
VPS16Q9H269 AC006128.1-201ENST00000624704 1661 ntBASIC22.98■■□□□ 1.27
VPS16Q9H269 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS16Q9H269 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS16Q9H269 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS16Q9H269 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.98■■□□□ 1.27
VPS16Q9H269 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
VPS16Q9H269 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS16Q9H269 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS16Q9H269 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.97■■□□□ 1.27
VPS16Q9H269 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VPS16Q9H269 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.97■■□□□ 1.27
VPS16Q9H269 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
VPS16Q9H269 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS16Q9H269 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.97■■□□□ 1.27
VPS16Q9H269 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.97■■□□□ 1.27
VPS16Q9H269 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
VPS16Q9H269 AC105233.4-201ENST00000642045 216 ntBASIC22.97■■□□□ 1.27
VPS16Q9H269 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.97■■□□□ 1.27
VPS16Q9H269 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VPS16Q9H269 TSPY26P-201ENST00000476365 1326 ntBASIC22.97■■□□□ 1.27
VPS16Q9H269 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
VPS16Q9H269 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
VPS16Q9H269 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.96■■□□□ 1.27
VPS16Q9H269 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS16Q9H269 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
VPS16Q9H269 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
VPS16Q9H269 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
VPS16Q9H269 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
VPS16Q9H269 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS16Q9H269 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
VPS16Q9H269 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS16Q9H269 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.96■■□□□ 1.27
VPS16Q9H269 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.96■■□□□ 1.27
VPS16Q9H269 AC096631.2-201ENST00000436136 790 ntBASIC22.96■■□□□ 1.27
VPS16Q9H269 PBX2P1-201ENST00000493219 1291 ntBASIC22.96■■□□□ 1.27
VPS16Q9H269 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.96■■□□□ 1.27
VPS16Q9H269 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS16Q9H269 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.96■■□□□ 1.27
VPS16Q9H269 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.96■■□□□ 1.27
VPS16Q9H269 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
VPS16Q9H269 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS16Q9H269 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
VPS16Q9H269 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
VPS16Q9H269 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS16Q9H269 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
VPS16Q9H269 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
VPS16Q9H269 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
VPS16Q9H269 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.95■■□□□ 1.26
VPS16Q9H269 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
VPS16Q9H269 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.95■■□□□ 1.26
VPS16Q9H269 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.95■■□□□ 1.26
VPS16Q9H269 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
VPS16Q9H269 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.95■■□□□ 1.26
VPS16Q9H269 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.95■■□□□ 1.26
VPS16Q9H269 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
VPS16Q9H269 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
VPS16Q9H269 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms