Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NUCKS1Q9H1E3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.69■■□□□ 1.22
NUCKS1Q9H1E3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.69■■□□□ 1.22
NUCKS1Q9H1E3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NUCKS1Q9H1E3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
NUCKS1Q9H1E3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NUCKS1Q9H1E3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NUCKS1Q9H1E3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 IRS3P-201ENST00000223076 1006 ntBASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NUCKS1Q9H1E3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.66■■□□□ 1.22
NUCKS1Q9H1E3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NUCKS1Q9H1E3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NUCKS1Q9H1E3 AL157384.1-201ENST00000445995 2473 ntBASIC22.65■■□□□ 1.22
NUCKS1Q9H1E3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NUCKS1Q9H1E3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.65■■□□□ 1.22
NUCKS1Q9H1E3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NUCKS1Q9H1E3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.65■■□□□ 1.22
NUCKS1Q9H1E3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NUCKS1Q9H1E3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NUCKS1Q9H1E3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NUCKS1Q9H1E3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NUCKS1Q9H1E3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NUCKS1Q9H1E3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NUCKS1Q9H1E3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NUCKS1Q9H1E3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
NUCKS1Q9H1E3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NUCKS1Q9H1E3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 FEM1AP1-201ENST00000431297 1995 ntBASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 AC006128.1-201ENST00000624704 1661 ntBASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NUCKS1Q9H1E3 AC055733.4-201ENST00000638462 1354 ntBASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 AC073130.3-201ENST00000624389 2278 ntBASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms