Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 EDA-201ENST00000338901 1233 ntBASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 AL031432.3-201ENST00000607698 485 ntBASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 AC136469.2-201ENST00000623944 1028 ntBASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AMBRA1Q9C0C7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 SLC47A1P1-202ENST00000449666 945 ntBASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 AP005435.1-201ENST00000529293 1178 ntBASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 GABARAPL3-202ENST00000624044 1851 ntBASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
AMBRA1Q9C0C7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 AP005212.1-201ENST00000581547 1997 ntBASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
AMBRA1Q9C0C7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 MIR4767-201ENST00000582827 78 ntBASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 AC005837.3-201ENST00000612163 286 ntBASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AMBRA1Q9C0C7 AC073314.1-201ENST00000568729 2216 ntBASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 AL391422.3-201ENST00000603791 2761 ntBASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.53■□□□□ 0.72
AMBRA1Q9C0C7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AMBRA1Q9C0C7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AMBRA1Q9C0C7 AP006587.3-201ENST00000525742 1516 ntBASIC19.52■□□□□ 0.72
AMBRA1Q9C0C7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
AMBRA1Q9C0C7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.52■□□□□ 0.72
AMBRA1Q9C0C7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AMBRA1Q9C0C7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
AMBRA1Q9C0C7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
AMBRA1Q9C0C7 SUDS3P1-201ENST00000505831 966 ntBASIC19.52■□□□□ 0.72
AMBRA1Q9C0C7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
AMBRA1Q9C0C7 AL355001.2-201ENST00000620617 1191 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms