Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 AL356473.1-201ENST00000406203 1408 ntBASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 NUP35P2-201ENST00000416748 943 ntBASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 CCDC144NL-AS1-206ENST00000443508 1216 ntTSL 3 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AL356259.1-201ENST00000443554 1059 ntTSL 5 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 SETP4-201ENST00000455717 868 ntBASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 MTCYBP44-201ENST00000514835 823 ntBASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AC090531.1-201ENST00000547168 923 ntTSL 3 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 CENPUP2-201ENST00000555897 1186 ntBASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AC078795.3-201ENST00000602913 472 ntBASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AC098935.2-201ENST00000604222 466 ntBASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AP003973.1-201ENST00000604639 691 ntBASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AC108865.2-201ENST00000606881 432 ntBASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AC126474.1-201ENST00000623555 1293 ntBASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 AP001350.2-201ENST00000625104 1094 ntBASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 MTND5P23-201ENST00000430812 1655 ntBASIC12.86□□□□□ -0.35
KRTAP3-3Q9BYR6 TMOD2-202ENST00000435126 1490 ntTSL 2 BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 RNU6-192P-201ENST00000391253 100 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 AC019294.1-201ENST00000395215 1184 ntTSL 2 BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 SKINT1L-201ENST00000401057 817 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 TMA16P2-201ENST00000413187 601 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 AL356806.1-201ENST00000422524 916 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 SETD6P1-201ENST00000444575 317 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 ZNF736P5Y-201ENST00000451173 805 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 EEF1A1P37-201ENST00000522748 715 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 AL136520.1-202ENST00000555494 763 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 ZNF738-203ENST00000594245 1086 ntTSL 2 BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 AC080078.2-201ENST00000603766 501 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 AC006273.1-201ENST00000606966 861 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 AP005212.4-201ENST00000614206 710 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 AP000676.4-201ENST00000624659 623 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 AC092119.2-201ENST00000616774 1491 ntBASIC12.85□□□□□ -0.35
KRTAP3-3Q9BYR6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 AL592494.2-201ENST00000425455 1548 ntBASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 RNU6-867P-201ENST00000364956 107 ntBASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 PPP1R2P1-210ENST00000429032 618 ntBASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 AC073911.1-202ENST00000443154 1151 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 ZNF101-204ENST00000444249 1152 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 AC012339.1-201ENST00000505564 941 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 MTATP6P15-201ENST00000527233 835 ntBASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 AC079866.1-201ENST00000534985 1220 ntBASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 AP4S1-206ENST00000554609 1012 ntTSL 5 BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 AL158062.1-201ENST00000619632 745 ntBASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 HPVC1-201ENST00000629899 1198 ntBASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 AL033527.5-202ENST00000641632 1098 ntBASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms