Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM9SF2Q99805 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM9SF2Q99805 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM9SF2Q99805 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF2Q99805 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF2Q99805 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF2Q99805 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
TM9SF2Q99805 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TM9SF2Q99805 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF2Q99805 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TM9SF2Q99805 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.35■□□□□ 0.69
TM9SF2Q99805 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF2Q99805 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.35■□□□□ 0.69
TM9SF2Q99805 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF2Q99805 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF2Q99805 LINC01960-201ENST00000563759 1884 ntBASIC19.35■□□□□ 0.69
TM9SF2Q99805 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF2Q99805 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TM9SF2Q99805 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF2Q99805 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF2Q99805 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.34■□□□□ 0.69
TM9SF2Q99805 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF2Q99805 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF2Q99805 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF2Q99805 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF2Q99805 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF2Q99805 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF2Q99805 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF2Q99805 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.34■□□□□ 0.69
TM9SF2Q99805 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.34■□□□□ 0.69
TM9SF2Q99805 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TM9SF2Q99805 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF2Q99805 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF2Q99805 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TM9SF2Q99805 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF2Q99805 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.34■□□□□ 0.69
TM9SF2Q99805 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TM9SF2Q99805 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM9SF2Q99805 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM9SF2Q99805 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM9SF2Q99805 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
TM9SF2Q99805 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TM9SF2Q99805 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF2Q99805 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
TM9SF2Q99805 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF2Q99805 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF2Q99805 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TM9SF2Q99805 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF2Q99805 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF2Q99805 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF2Q99805 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF2Q99805 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
TM9SF2Q99805 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF2Q99805 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF2Q99805 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.32■□□□□ 0.68
TM9SF2Q99805 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.32■□□□□ 0.68
TM9SF2Q99805 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
TM9SF2Q99805 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.32■□□□□ 0.68
TM9SF2Q99805 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.32■□□□□ 0.68
TM9SF2Q99805 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TM9SF2Q99805 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF2Q99805 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.32■□□□□ 0.68
TM9SF2Q99805 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TM9SF2Q99805 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF2Q99805 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF2Q99805 AL157384.1-201ENST00000445995 2473 ntBASIC19.32■□□□□ 0.68
TM9SF2Q99805 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF2Q99805 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF2Q99805 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.31■□□□□ 0.68
TM9SF2Q99805 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
TM9SF2Q99805 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF2Q99805 AF106564.1-201ENST00000607058 2553 ntBASIC19.31■□□□□ 0.68
TM9SF2Q99805 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.31■□□□□ 0.68
TM9SF2Q99805 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF2Q99805 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF2Q99805 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.31■□□□□ 0.68
TM9SF2Q99805 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF2Q99805 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF2Q99805 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF2Q99805 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF2Q99805 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.31■□□□□ 0.68
TM9SF2Q99805 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.31■□□□□ 0.68
TM9SF2Q99805 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.31■□□□□ 0.68
TM9SF2Q99805 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF2Q99805 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.3■□□□□ 0.68
TM9SF2Q99805 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.3■□□□□ 0.68
TM9SF2Q99805 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF2Q99805 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF2Q99805 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.3■□□□□ 0.68
TM9SF2Q99805 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.3■□□□□ 0.68
TM9SF2Q99805 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.3■□□□□ 0.68
TM9SF2Q99805 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
TM9SF2Q99805 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF2Q99805 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TM9SF2Q99805 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.3■□□□□ 0.68
TM9SF2Q99805 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TM9SF2Q99805 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF2Q99805 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF2Q99805 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF2Q99805 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms