Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SCAF11Q99590 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SCAF11Q99590 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC30.36■■■□□ 2.45
SCAF11Q99590 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
SCAF11Q99590 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
SCAF11Q99590 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SCAF11Q99590 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
SCAF11Q99590 CYP2T3P-201ENST00000601990 817 ntBASIC30.36■■■□□ 2.45
SCAF11Q99590 Z99916.2-201ENST00000604037 246 ntBASIC30.36■■■□□ 2.45
SCAF11Q99590 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC30.36■■■□□ 2.45
SCAF11Q99590 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC30.36■■■□□ 2.45
SCAF11Q99590 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF11Q99590 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF11Q99590 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC30.35■■■□□ 2.45
SCAF11Q99590 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
SCAF11Q99590 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF11Q99590 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF11Q99590 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF11Q99590 AC211429.1-201ENST00000415277 523 ntBASIC30.35■■■□□ 2.45
SCAF11Q99590 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC30.35■■■□□ 2.45
SCAF11Q99590 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC30.35■■■□□ 2.45
SCAF11Q99590 RPS20-210ENST00000523936 899 ntTSL 2 BASIC30.35■■■□□ 2.45
SCAF11Q99590 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF11Q99590 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
SCAF11Q99590 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF11Q99590 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF11Q99590 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF11Q99590 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF11Q99590 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF11Q99590 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF11Q99590 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC30.34■■■□□ 2.45
SCAF11Q99590 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
SCAF11Q99590 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC30.34■■■□□ 2.45
SCAF11Q99590 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC30.34■■■□□ 2.45
SCAF11Q99590 LINC01023-201ENST00000606054 436 ntBASIC30.34■■■□□ 2.45
SCAF11Q99590 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF11Q99590 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF11Q99590 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF11Q99590 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SCAF11Q99590 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
SCAF11Q99590 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC30.33■■■□□ 2.45
SCAF11Q99590 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SCAF11Q99590 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SCAF11Q99590 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC30.33■■■□□ 2.45
SCAF11Q99590 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SCAF11Q99590 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC30.33■■■□□ 2.45
SCAF11Q99590 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
SCAF11Q99590 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC30.33■■■□□ 2.45
SCAF11Q99590 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
SCAF11Q99590 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SCAF11Q99590 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC30.32■■■□□ 2.44
SCAF11Q99590 AC233263.1-201ENST00000578059 224 ntBASIC30.32■■■□□ 2.44
SCAF11Q99590 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC30.32■■■□□ 2.44
SCAF11Q99590 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC30.32■■■□□ 2.44
SCAF11Q99590 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC30.31■■■□□ 2.44
SCAF11Q99590 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC30.31■■■□□ 2.44
SCAF11Q99590 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SCAF11Q99590 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SCAF11Q99590 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SCAF11Q99590 MDFI-202ENST00000373050 809 ntTSL 2 BASIC30.31■■■□□ 2.44
SCAF11Q99590 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC30.31■■■□□ 2.44
SCAF11Q99590 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC30.31■■■□□ 2.44
SCAF11Q99590 PNMA6B-201ENST00000538162 1200 ntBASIC30.31■■■□□ 2.44
SCAF11Q99590 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC30.31■■■□□ 2.44
SCAF11Q99590 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
SCAF11Q99590 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SCAF11Q99590 AL355472.2-201ENST00000422958 438 ntBASIC30.3■■■□□ 2.44
SCAF11Q99590 AC069544.1-201ENST00000609399 999 ntBASIC30.3■■■□□ 2.44
SCAF11Q99590 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC30.3■■■□□ 2.44
SCAF11Q99590 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF11Q99590 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC30.29■■■□□ 2.44
SCAF11Q99590 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC30.29■■■□□ 2.44
SCAF11Q99590 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF11Q99590 AC139530.1-201ENST00000575312 1977 ntBASIC30.29■■■□□ 2.44
SCAF11Q99590 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
SCAF11Q99590 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
SCAF11Q99590 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF11Q99590 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC30.29■■■□□ 2.44
SCAF11Q99590 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC30.29■■■□□ 2.44
SCAF11Q99590 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC30.29■■■□□ 2.44
SCAF11Q99590 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF11Q99590 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF11Q99590 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SCAF11Q99590 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SCAF11Q99590 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SCAF11Q99590 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SCAF11Q99590 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
SCAF11Q99590 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC30.28■■■□□ 2.44
SCAF11Q99590 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SCAF11Q99590 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SCAF11Q99590 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC30.28■■■□□ 2.44
SCAF11Q99590 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
SCAF11Q99590 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
SCAF11Q99590 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
SCAF11Q99590 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC30.27■■■□□ 2.44
SCAF11Q99590 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
SCAF11Q99590 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SCAF11Q99590 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SCAF11Q99590 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC30.27■■■□□ 2.44
SCAF11Q99590 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC30.26■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms