Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
NOTCH4Q99466 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.81■■□□□ 1.08
NOTCH4Q99466 AC026366.1-201ENST00000488803 879 ntBASIC21.81■■□□□ 1.08
NOTCH4Q99466 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.81■■□□□ 1.08
NOTCH4Q99466 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NOTCH4Q99466 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NOTCH4Q99466 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NOTCH4Q99466 AC092053.2-201ENST00000640557 1818 ntBASIC21.8■■□□□ 1.08
NOTCH4Q99466 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NOTCH4Q99466 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOTCH4Q99466 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOTCH4Q99466 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NOTCH4Q99466 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NOTCH4Q99466 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOTCH4Q99466 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.8■■□□□ 1.08
NOTCH4Q99466 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOTCH4Q99466 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOTCH4Q99466 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.8■■□□□ 1.08
NOTCH4Q99466 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NOTCH4Q99466 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NOTCH4Q99466 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.8■■□□□ 1.08
NOTCH4Q99466 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.8■■□□□ 1.08
NOTCH4Q99466 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOTCH4Q99466 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NOTCH4Q99466 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NOTCH4Q99466 C1orf229-201ENST00000623686 2258 ntBASIC21.79■■□□□ 1.08
NOTCH4Q99466 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.79■■□□□ 1.08
NOTCH4Q99466 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
NOTCH4Q99466 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.79■■□□□ 1.08
NOTCH4Q99466 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NOTCH4Q99466 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
NOTCH4Q99466 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NOTCH4Q99466 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.79■■□□□ 1.08
NOTCH4Q99466 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.79■■□□□ 1.08
NOTCH4Q99466 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.79■■□□□ 1.08
NOTCH4Q99466 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.79■■□□□ 1.08
NOTCH4Q99466 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.79■■□□□ 1.08
NOTCH4Q99466 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NOTCH4Q99466 AC007322.3-201ENST00000426526 701 ntBASIC21.79■■□□□ 1.08
NOTCH4Q99466 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.79■■□□□ 1.08
NOTCH4Q99466 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NOTCH4Q99466 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOTCH4Q99466 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.78■■□□□ 1.08
NOTCH4Q99466 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.78■■□□□ 1.08
NOTCH4Q99466 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOTCH4Q99466 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOTCH4Q99466 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NOTCH4Q99466 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOTCH4Q99466 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.78■■□□□ 1.08
NOTCH4Q99466 AC060766.5-201ENST00000590539 871 ntBASIC21.78■■□□□ 1.08
NOTCH4Q99466 FAM21FP-204ENST00000608637 956 ntBASIC21.78■■□□□ 1.08
NOTCH4Q99466 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOTCH4Q99466 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NOTCH4Q99466 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.77■■□□□ 1.08
NOTCH4Q99466 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.77■■□□□ 1.08
NOTCH4Q99466 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.77■■□□□ 1.08
NOTCH4Q99466 AL158047.1-201ENST00000445918 881 ntBASIC21.77■■□□□ 1.08
NOTCH4Q99466 AC100791.3-201ENST00000617619 330 ntBASIC21.77■■□□□ 1.08
NOTCH4Q99466 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NOTCH4Q99466 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
NOTCH4Q99466 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.77■■□□□ 1.08
NOTCH4Q99466 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.77■■□□□ 1.08
NOTCH4Q99466 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.77■■□□□ 1.08
NOTCH4Q99466 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NOTCH4Q99466 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.77■■□□□ 1.08
NOTCH4Q99466 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.77■■□□□ 1.07
NOTCH4Q99466 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.77■■□□□ 1.07
NOTCH4Q99466 AC128676.1-201ENST00000454392 318 ntBASIC21.77■■□□□ 1.07
NOTCH4Q99466 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.77■■□□□ 1.07
NOTCH4Q99466 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
NOTCH4Q99466 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NOTCH4Q99466 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NOTCH4Q99466 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NOTCH4Q99466 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NOTCH4Q99466 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NOTCH4Q99466 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.76■■□□□ 1.07
NOTCH4Q99466 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NOTCH4Q99466 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NOTCH4Q99466 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.76■■□□□ 1.07
NOTCH4Q99466 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NOTCH4Q99466 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.75■■□□□ 1.07
NOTCH4Q99466 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NOTCH4Q99466 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.75■■□□□ 1.07
NOTCH4Q99466 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.75■■□□□ 1.07
NOTCH4Q99466 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NOTCH4Q99466 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NOTCH4Q99466 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NOTCH4Q99466 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NOTCH4Q99466 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NOTCH4Q99466 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NOTCH4Q99466 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.75■■□□□ 1.07
NOTCH4Q99466 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NOTCH4Q99466 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
NOTCH4Q99466 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NOTCH4Q99466 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NOTCH4Q99466 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NOTCH4Q99466 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NOTCH4Q99466 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.74■■□□□ 1.07
NOTCH4Q99466 AC245052.3-201ENST00000450182 901 ntBASIC21.74■■□□□ 1.07
NOTCH4Q99466 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms