Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 AL135905.2-201ENST00000584934 1404 ntBASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CNTNAP3BQ96NU0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP3BQ96NU0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.08■□□□□ 0.81
CNTNAP3BQ96NU0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP3BQ96NU0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP3BQ96NU0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP3BQ96NU0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CNTNAP3BQ96NU0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.08■□□□□ 0.81
CNTNAP3BQ96NU0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP3BQ96NU0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.08■□□□□ 0.81
CNTNAP3BQ96NU0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.08■□□□□ 0.81
CNTNAP3BQ96NU0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP3BQ96NU0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP3BQ96NU0 AC004687.1-201ENST00000579003 1625 ntBASIC20.08■□□□□ 0.8
CNTNAP3BQ96NU0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CNTNAP3BQ96NU0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP3BQ96NU0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 KRT18P56-201ENST00000507275 550 ntBASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.07■□□□□ 0.8
CNTNAP3BQ96NU0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 SOX15-203ENST00000570788 1093 ntBASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 AC092368.3-202ENST00000574180 1591 ntBASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3BQ96NU0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 AC145285.6-201ENST00000604632 637 ntBASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP3BQ96NU0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 SLC6A10P-202ENST00000431994 2058 ntBASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 KRT17P1-201ENST00000399211 1546 ntBASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 AL162412.1-201ENST00000567129 965 ntBASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 AL591742.1-201ENST00000604433 565 ntBASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP3BQ96NU0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 AL139125.2-201ENST00000623134 1869 ntBASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms