Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
CDHR1Q96JP9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
CDHR1Q96JP9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDHR1Q96JP9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDHR1Q96JP9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDHR1Q96JP9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.58■■□□□ 1.37
CDHR1Q96JP9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.58■■□□□ 1.37
CDHR1Q96JP9 MKRN4P-201ENST00000444706 1521 ntBASIC23.58■■□□□ 1.36
CDHR1Q96JP9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDHR1Q96JP9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDHR1Q96JP9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.57■■□□□ 1.36
CDHR1Q96JP9 AC073210.2-201ENST00000430369 194 ntBASIC23.57■■□□□ 1.36
CDHR1Q96JP9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.57■■□□□ 1.36
CDHR1Q96JP9 RARRES2P4-201ENST00000514074 484 ntBASIC23.57■■□□□ 1.36
CDHR1Q96JP9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDHR1Q96JP9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDHR1Q96JP9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDHR1Q96JP9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.57■■□□□ 1.36
CDHR1Q96JP9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.57■■□□□ 1.36
CDHR1Q96JP9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.57■■□□□ 1.36
CDHR1Q96JP9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 AC091799.1-201ENST00000422823 811 ntBASIC23.56■■□□□ 1.36
CDHR1Q96JP9 AC016405.3-201ENST00000607710 860 ntBASIC23.56■■□□□ 1.36
CDHR1Q96JP9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDHR1Q96JP9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.55■■□□□ 1.36
CDHR1Q96JP9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDHR1Q96JP9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDHR1Q96JP9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDHR1Q96JP9 CDV3P1-201ENST00000471403 739 ntBASIC23.55■■□□□ 1.36
CDHR1Q96JP9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.55■■□□□ 1.36
CDHR1Q96JP9 AL138781.1-201ENST00000566567 1274 ntBASIC23.55■■□□□ 1.36
CDHR1Q96JP9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.55■■□□□ 1.36
CDHR1Q96JP9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.55■■□□□ 1.36
CDHR1Q96JP9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDHR1Q96JP9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDHR1Q96JP9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.54■■□□□ 1.36
CDHR1Q96JP9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CDHR1Q96JP9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDHR1Q96JP9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.54■■□□□ 1.36
CDHR1Q96JP9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CDHR1Q96JP9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDHR1Q96JP9 MIR4758-201ENST00000577688 71 ntBASIC23.54■■□□□ 1.36
CDHR1Q96JP9 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.54■■□□□ 1.36
CDHR1Q96JP9 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.54■■□□□ 1.36
CDHR1Q96JP9 AC133041.1-202ENST00000642053 222 ntBASIC23.54■■□□□ 1.36
CDHR1Q96JP9 AL117328.2-201ENST00000624617 1940 ntBASIC23.54■■□□□ 1.36
CDHR1Q96JP9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CDHR1Q96JP9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDHR1Q96JP9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDHR1Q96JP9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
CDHR1Q96JP9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 AC069152.1-201ENST00000438030 544 ntBASIC23.53■■□□□ 1.36
CDHR1Q96JP9 AC093787.1-201ENST00000450396 207 ntBASIC23.53■■□□□ 1.36
CDHR1Q96JP9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 FAM21FP-204ENST00000608637 956 ntBASIC23.53■■□□□ 1.36
CDHR1Q96JP9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDHR1Q96JP9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.52■■□□□ 1.36
CDHR1Q96JP9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDHR1Q96JP9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.52■■□□□ 1.36
CDHR1Q96JP9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDHR1Q96JP9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDHR1Q96JP9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDHR1Q96JP9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
CDHR1Q96JP9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.52■■□□□ 1.36
CDHR1Q96JP9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.52■■□□□ 1.36
CDHR1Q96JP9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDHR1Q96JP9 MIPEPP3-201ENST00000412105 444 ntBASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms