Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SPG11Q96JI7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.89■□□□□ 0.45
SPG11Q96JI7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPG11Q96JI7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPG11Q96JI7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPG11Q96JI7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.88■□□□□ 0.45
SPG11Q96JI7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SPG11Q96JI7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPG11Q96JI7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.88■□□□□ 0.45
SPG11Q96JI7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPG11Q96JI7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPG11Q96JI7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPG11Q96JI7 AC079089.2-201ENST00000531211 1277 ntBASIC17.88■□□□□ 0.45
SPG11Q96JI7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SPG11Q96JI7 AC092068.2-201ENST00000590491 1708 ntBASIC17.88■□□□□ 0.45
SPG11Q96JI7 FAM197Y4-202ENST00000622692 608 ntBASIC17.88■□□□□ 0.45
SPG11Q96JI7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.87■□□□□ 0.45
SPG11Q96JI7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPG11Q96JI7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.87■□□□□ 0.45
SPG11Q96JI7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPG11Q96JI7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.87■□□□□ 0.45
SPG11Q96JI7 AC137767.1-201ENST00000602918 1920 ntBASIC17.87■□□□□ 0.45
SPG11Q96JI7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.87■□□□□ 0.45
SPG11Q96JI7 KRT18P21-201ENST00000515767 1272 ntBASIC17.87■□□□□ 0.45
SPG11Q96JI7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SPG11Q96JI7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SPG11Q96JI7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPG11Q96JI7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.87■□□□□ 0.45
SPG11Q96JI7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.87■□□□□ 0.45
SPG11Q96JI7 AC060766.5-201ENST00000590539 871 ntBASIC17.87■□□□□ 0.45
SPG11Q96JI7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.87■□□□□ 0.45
SPG11Q96JI7 AL049637.2-201ENST00000641778 930 ntBASIC17.87■□□□□ 0.45
SPG11Q96JI7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPG11Q96JI7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SPG11Q96JI7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPG11Q96JI7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SPG11Q96JI7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPG11Q96JI7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SPG11Q96JI7 POM121L13P-201ENST00000422362 380 ntBASIC17.86■□□□□ 0.45
SPG11Q96JI7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPG11Q96JI7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SPG11Q96JI7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPG11Q96JI7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SPG11Q96JI7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPG11Q96JI7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SPG11Q96JI7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.86■□□□□ 0.45
SPG11Q96JI7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPG11Q96JI7 SOX15-203ENST00000570788 1093 ntBASIC17.86■□□□□ 0.45
SPG11Q96JI7 AL589743.5-201ENST00000616611 1050 ntBASIC17.86■□□□□ 0.45
SPG11Q96JI7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.85■□□□□ 0.45
SPG11Q96JI7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SPG11Q96JI7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPG11Q96JI7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPG11Q96JI7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SPG11Q96JI7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SPG11Q96JI7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPG11Q96JI7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.85■□□□□ 0.45
SPG11Q96JI7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.85■□□□□ 0.45
SPG11Q96JI7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SPG11Q96JI7 AC100791.3-201ENST00000617619 330 ntBASIC17.85■□□□□ 0.45
SPG11Q96JI7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPG11Q96JI7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SPG11Q96JI7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPG11Q96JI7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPG11Q96JI7 KRT17P3-201ENST00000420566 1262 ntBASIC17.84■□□□□ 0.45
SPG11Q96JI7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPG11Q96JI7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SPG11Q96JI7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.84■□□□□ 0.45
SPG11Q96JI7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPG11Q96JI7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SPG11Q96JI7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SPG11Q96JI7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.83■□□□□ 0.45
SPG11Q96JI7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SPG11Q96JI7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.83■□□□□ 0.45
SPG11Q96JI7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.83■□□□□ 0.45
SPG11Q96JI7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.83■□□□□ 0.45
SPG11Q96JI7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SPG11Q96JI7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SPG11Q96JI7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.83■□□□□ 0.45
SPG11Q96JI7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.83■□□□□ 0.45
SPG11Q96JI7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPG11Q96JI7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPG11Q96JI7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.83■□□□□ 0.44
SPG11Q96JI7 AIRN-201ENST00000601203 4374 ntBASIC17.83■□□□□ 0.44
SPG11Q96JI7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms