Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CNOT9Q92600 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT9Q92600 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT9Q92600 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT9Q92600 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.29■□□□□ 0.68
CNOT9Q92600 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT9Q92600 AC027612.3-201ENST00000413684 1047 ntBASIC19.29■□□□□ 0.68
CNOT9Q92600 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.29■□□□□ 0.68
CNOT9Q92600 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.29■□□□□ 0.68
CNOT9Q92600 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT9Q92600 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CNOT9Q92600 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.29■□□□□ 0.68
CNOT9Q92600 AL049796.1-201ENST00000565336 1766 ntBASIC19.29■□□□□ 0.68
CNOT9Q92600 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT9Q92600 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT9Q92600 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT9Q92600 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.28■□□□□ 0.68
CNOT9Q92600 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.28■□□□□ 0.68
CNOT9Q92600 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT9Q92600 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT9Q92600 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT9Q92600 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT9Q92600 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT9Q92600 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.28■□□□□ 0.68
CNOT9Q92600 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.28■□□□□ 0.68
CNOT9Q92600 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.28■□□□□ 0.68
CNOT9Q92600 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CNOT9Q92600 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT9Q92600 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT9Q92600 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CNOT9Q92600 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT9Q92600 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT9Q92600 ZNRF2P3-201ENST00000424200 374 ntBASIC19.27■□□□□ 0.68
CNOT9Q92600 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT9Q92600 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT9Q92600 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.27■□□□□ 0.68
CNOT9Q92600 EEF1DP3-203ENST00000566025 782 ntBASIC19.27■□□□□ 0.68
CNOT9Q92600 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.27■□□□□ 0.68
CNOT9Q92600 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT9Q92600 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT9Q92600 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT9Q92600 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT9Q92600 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
CNOT9Q92600 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNOT9Q92600 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNOT9Q92600 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CNOT9Q92600 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT9Q92600 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT9Q92600 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT9Q92600 AC079140.4-201ENST00000507448 529 ntBASIC19.26■□□□□ 0.67
CNOT9Q92600 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.26■□□□□ 0.67
CNOT9Q92600 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CNOT9Q92600 AC053503.5-201ENST00000601508 636 ntBASIC19.26■□□□□ 0.67
CNOT9Q92600 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.26■□□□□ 0.67
CNOT9Q92600 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.26■□□□□ 0.67
CNOT9Q92600 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CNOT9Q92600 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT9Q92600 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.25■□□□□ 0.67
CNOT9Q92600 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.25■□□□□ 0.67
CNOT9Q92600 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT9Q92600 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT9Q92600 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.25■□□□□ 0.67
CNOT9Q92600 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CNOT9Q92600 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.25■□□□□ 0.67
CNOT9Q92600 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT9Q92600 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CNOT9Q92600 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT9Q92600 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.25■□□□□ 0.67
CNOT9Q92600 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT9Q92600 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT9Q92600 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CNOT9Q92600 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CNOT9Q92600 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT9Q92600 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT9Q92600 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.24■□□□□ 0.67
CNOT9Q92600 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT9Q92600 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT9Q92600 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT9Q92600 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT9Q92600 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT9Q92600 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CNOT9Q92600 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.24■□□□□ 0.67
CNOT9Q92600 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT9Q92600 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT9Q92600 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT9Q92600 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT9Q92600 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT9Q92600 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT9Q92600 LINC02228-203ENST00000641970 1355 ntBASIC19.23■□□□□ 0.67
CNOT9Q92600 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CNOT9Q92600 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CNOT9Q92600 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT9Q92600 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.23■□□□□ 0.67
CNOT9Q92600 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT9Q92600 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT9Q92600 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.23■□□□□ 0.67
CNOT9Q92600 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.23■□□□□ 0.67
CNOT9Q92600 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT9Q92600 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CNOT9Q92600 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms