Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40AQ8WXH6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB40AQ8WXH6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 OR7E47P-201ENST00000546390 1422 ntBASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
RAB40AQ8WXH6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB40AQ8WXH6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB40AQ8WXH6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.33■□□□□ 0.53
RAB40AQ8WXH6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.33■□□□□ 0.53
RAB40AQ8WXH6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.33■□□□□ 0.53
RAB40AQ8WXH6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB40AQ8WXH6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB40AQ8WXH6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 AC126544.1-201ENST00000580842 1059 ntBASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 GABARAPL3-202ENST00000624044 1851 ntBASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40AQ8WXH6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms