Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 POM121L13P-201ENST00000422362 380 ntBASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ALMS1Q8TCU4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 AL023875.1-201ENST00000640777 796 ntBASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.31□□□□□ -0.12
ALMS1Q8TCU4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 AC124016.1-201ENST00000609552 612 ntBASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 ANOS2P-203ENST00000472227 1816 ntBASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 ARMC10P1-201ENST00000313754 855 ntBASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 RARRES2P10-201ENST00000564312 460 ntBASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 MIR6786-201ENST00000616843 113 ntBASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 AC145285.6-201ENST00000604632 637 ntBASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 AC105020.6-201ENST00000621523 1217 ntBASIC14.3□□□□□ -0.12
ALMS1Q8TCU4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ALMS1Q8TCU4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms