Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 AC003102.1-202ENST00000563394 1796 ntBASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
DNAAF1Q8NEP3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNAAF1Q8NEP3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
DNAAF1Q8NEP3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNAAF1Q8NEP3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DNAAF1Q8NEP3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DNAAF1Q8NEP3 SLC47A1P1-202ENST00000449666 945 ntBASIC18.34■□□□□ 0.53
DNAAF1Q8NEP3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.34■□□□□ 0.53
DNAAF1Q8NEP3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNAAF1Q8NEP3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.34■□□□□ 0.53
DNAAF1Q8NEP3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DNAAF1Q8NEP3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
DNAAF1Q8NEP3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DNAAF1Q8NEP3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DNAAF1Q8NEP3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.33■□□□□ 0.53
DNAAF1Q8NEP3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DNAAF1Q8NEP3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DNAAF1Q8NEP3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DNAAF1Q8NEP3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 AC007952.6-201ENST00000573168 2673 ntBASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 AC003957.1-201ENST00000625108 2673 ntBASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 AL391422.3-201ENST00000603791 2761 ntBASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms