Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 AC006455.2-201ENST00000429931 906 ntBASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 MIR6724-1-201ENST00000616420 92 ntBASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 MIR6724-2-201ENST00000616483 92 ntBASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 MIR6724-4-201ENST00000617390 92 ntBASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 MIR6724-3-201ENST00000622482 92 ntBASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 AP004607.7-201ENST00000527152 1677 ntBASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 AP005212.1-201ENST00000581547 1997 ntBASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71LQ8N9Z2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC71LQ8N9Z2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC71LQ8N9Z2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.39■□□□□ 0.38
CCDC71LQ8N9Z2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC71LQ8N9Z2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
CCDC71LQ8N9Z2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.39■□□□□ 0.38
CCDC71LQ8N9Z2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71LQ8N9Z2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC71LQ8N9Z2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC71LQ8N9Z2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms